Information for 5-CCCCTAGCTGTCA (Motif 5)

A T G C A G T C G T A C T G A C A G C T C G T A A T C G T A G C C A G T A C T G G A C T A T G C G C T A
Reverse Opposite:
C G A T T A C G C T G A T A G C G T C A A T C G T A G C G C A T T C G A A C T G C A T G T C A G T A C G
p-value:1e-20
log p-value:-4.713e+01
Information Content per bp:1.638
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif5.66%
Number of Background Sequences with motif497.7
Percentage of Background Sequences with motif1.05%
Average Position of motif in Targets53.6 +/- 22.6bp
Average Position of motif in Background49.1 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0169.1_Tgif1/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:CCCCTAGCTGTCA-----
-NNNCAGCTGTCAATATN
 A T G C A G T C G T A C T G A C A G C T C G T A A T C G T A G C C A G T A C T G G A C T A T G C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.75
Offset:6
Orientation:reverse strand
Alignment:CCCCTAGCTGTCA-
------GCTGTCAA
 A T G C A G T C G T A C T G A C A G C T C G T A A T C G T A G C C A G T A C T G G A C T A T G C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCCCTAGCTGTCA----
-AACTAGCTGTCAATAC
 A T G C A G T C G T A C T G A C A G C T C G T A A T C G T A G C C A G T A C T G G A C T A T G C G C T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.73
Offset:6
Orientation:reverse strand
Alignment:CCCCTAGCTGTCA-
------CCTGTCAA
 A T G C A G T C G T A C T G A C A G C T C G T A A T C G T A G C C A G T A C T G G A C T A T G C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.72
Offset:5
Orientation:forward strand
Alignment:CCCCTAGCTGTCA--
-----VGCTGWCAVB
 A T G C A G T C G T A C T G A C A G C T C G T A A T C G T A G C C A G T A C T G G A C T A T G C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

PH0102.1_Meis1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCCCTAGCTGTCA----
-AACGAGCTGTCAATAC
 A T G C A G T C G T A C T G A C A G C T C G T A A T C G T A G C C A G T A C T G G A C T A T G C G C T A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

MEIS1/MA0498.2/Jaspar

Match Rank:7
Score:0.70
Offset:7
Orientation:reverse strand
Alignment:CCCCTAGCTGTCA-
-------NTGTCAN
 A T G C A G T C G T A C T G A C A G C T C G T A A T C G T A G C C A G T A C T G G A C T A T G C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCCCTAGCTGTCA----
-AAAGACCTGTCAATAC
 A T G C A G T C G T A C T G A C A G C T C G T A A T C G T A G C C A G T A C T G G A C T A T G C G C T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCCCTAGCTGTCA----
-AATTACCTGTCAATAC
 A T G C A G T C G T A C T G A C A G C T C G T A A T C G T A G C C A G T A C T G G A C T A T G C G C T A A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCCCTAGCTGTCA----
-AAGCACCTGTCAATAT
 A T G C A G T C G T A C T G A C A G C T C G T A A T C G T A G C C A G T A C T G G A C T A T G C G C T A A C G T A C G T A C G T A C G T
A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T