| p-value: | 1e-27 |
| log p-value: | -6.382e+01 |
| Information Content per bp: | 1.612 |
| Number of Target Sequences with motif | 35.0 |
| Percentage of Target Sequences with motif | 3.96% |
| Number of Background Sequences with motif | 131.3 |
| Percentage of Background Sequences with motif | 0.28% |
| Average Position of motif in Targets | 55.6 +/- 20.8bp |
| Average Position of motif in Background | 49.3 +/- 30.7bp |
| Strand Bias (log2 ratio + to - strand density) | -0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.09 |
| Motif File: | file (matrix)
reverse opposite |
| SVG Files for Logos: | forward logo
reverse opposite |
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 1 |
| Score: | 0.93
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TYGCCATGGMAACCCB
TTGCCATGGCAACC-- |
|
|
|
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 2 |
| Score: | 0.93
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TYGCCATGGMAACCCB
TTGCCATGGCAACN-- |
|
|
|
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
| Match Rank: | 3 |
| Score: | 0.89
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TYGCCATGGMAACCCB
GTTGCCATGGCAACM-- |
|
|
|
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
| Match Rank: | 4 |
| Score: | 0.88
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TYGCCATGGMAACCCB
GTTGCCATGGCAACCG- |
|
|
|
RFX3/MA0798.1/Jaspar
| Match Rank: | 5 |
| Score: | 0.86
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --TYGCCATGGMAACCCB
CGTTGCCATGGCAACG-- |
|
|
|
Rfx1/MA0509.1/Jaspar
| Match Rank: | 6 |
| Score: | 0.85
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -TYGCCATGGMAACCCB
GTTGCCATGGCAAC--- |
|
|
|
RFX5/MA0510.2/Jaspar
| Match Rank: | 7 |
| Score: | 0.85
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --TYGCCATGGMAACCCB
CGTTGCCATGGCAACG-- |
|
|
|
RFX2/MA0600.2/Jaspar
| Match Rank: | 8 |
| Score: | 0.85
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TYGCCATGGMAACCCB
CGTTGCCATGGCAACG-- |
|
|
|
RFX4/MA0799.1/Jaspar
| Match Rank: | 9 |
| Score: | 0.84
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --TYGCCATGGMAACCCB
CGTTGCCATGGCAACG-- |
|
|
|
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 10 |
| Score: | 0.66
| | Offset: | 3
| | Orientation: | forward strand |
| Alignment: | TYGCCATGGMAACCCB
---SCCTAGCAACAG- |
|
|
|
