Information for 12-CTCTAGCAACAAG (Motif 15)

A T G C A G C T A G T C A C G T C G T A A T C G A G T C C G T A C G T A A G T C T C G A C G T A A C T G
Reverse Opposite:
A G T C C G A T A G C T A C T G A C G T A C G T A C T G A T G C A C G T C G T A A C T G C T G A A T C G
p-value:1e-10
log p-value:-2.394e+01
Information Content per bp:1.907
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.8 +/- 26.5bp
Average Position of motif in Background71.3 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CTCTAGCAACAAG
SCCTAGCAACAG-
 A T G C A G C T A G T C A C G T C G T A A T C G A G T C C G T A C G T A A G T C T C G A C G T A A C T G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:2
Score:0.72
Offset:-6
Orientation:forward strand
Alignment:------CTCTAGCAACAAG----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A G T C A C G T C G T A A T C G A G T C C G T A C G T A A G T C T C G A C G T A A C T G A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTCTAGCAACAAG
TACCATAGCAACGGT
 A C G T A C G T A T G C A G C T A G T C A C G T C G T A A T C G A G T C C G T A C G T A A G T C T C G A C G T A A C T G
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTCTAGCAACAAG
CCGCATAGCAACGGA
 A C G T A C G T A T G C A G C T A G T C A C G T C G T A A T C G A G T C C G T A C G T A A G T C T C G A C G T A A C T G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:5
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CTCTAGCAACAAG
TGTTKCCTAGCAACM--
 A C G T A C G T A C G T A C G T A T G C A G C T A G T C A C G T C G T A A T C G A G T C C G T A C G T A A G T C T C G A C G T A A C T G
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCTAGCAACAAG
GGCTCYAKCAYC---
 A C G T A C G T A T G C A G C T A G T C A C G T C G T A A T C G A G T C C G T A C G T A A G T C T C G A C G T A A C T G
C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CTCTAGCAACAAG
GTTGCCATGGCAAC---
 A C G T A C G T A C G T A C G T A T G C A G C T A G T C A C G T C G T A A T C G A G T C C G T A C G T A A G T C T C G A C G T A A C T G
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTCTAGCAACAAG-----
---GAGCAACAGGTGGTT
 A T G C A G C T A G T C A C G T C G T A A T C G A G T C C G T A C G T A A G T C T C G A C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTCTAGCAACAAG---
---ATGCAACAGGTGG
 A T G C A G C T A G T C A C G T C G T A A T C G A G T C C G T A C G T A A G T C T C G A C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCTAGCAACAAG--
AACAAACAACAAGAG
 A T G C A G C T A G T C A C G T C G T A A T C G A G T C C G T A C G T A A G T C T C G A C G T A A C T G A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G