Information for 3-TAGTGTGAADGGA (Motif 4)

A C G T C G T A A C T G A C G T A C T G C G A T A C T G C G T A C G T A C A T G C T A G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C G A T C A C G T A C G T A G T C C G T A A G T C C G T A G T A C A C G T G T C A
p-value:1e-13
log p-value:-3.202e+01
Information Content per bp:1.866
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.9 +/- 30.8bp
Average Position of motif in Background45.0 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBR1/MA0802.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAGTGTGAADGGA
AGGTGTGAAA---
 A C G T C G T A A C T G A C G T A C T G C G A T A C T G C G T A C G T A C A T G C T A G A T C G C G T A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAGTGTGAADGGA
TAGGTGTGAAG---
 A C G T A C G T C G T A A C T G A C G T A C T G C G A T A C T G C G T A C G T A C A T G C T A G A T C G C G T A
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TAGTGTGAADGGA
AAGGTGTGAA----
 A C G T A C G T C G T A A C T G A C G T A C T G C G A T A C T G C G T A C G T A C A T G C T A G A T C G C G T A
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAGTGTGAADGGA
AGGTGTGAAM---
 A C G T C G T A A C T G A C G T A C T G C G A T A C T G C G T A C G T A C A T G C T A G A T C G C G T A
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAGTGTGAADGGA
AAGGTGTGAAA---
 A C G T A C G T C G T A A C T G A C G T A C T G C G A T A C T G C G T A C G T A C A T G C T A G A T C G C G T A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAGTGTGAADGGA
AAGGTGTKAA----
 A C G T A C G T C G T A A C T G A C G T A C T G C G A T A C T G C G T A C G T A C A T G C T A G A T C G C G T A
C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TAGTGTGAADGGA
AAGGTGTGAAAAT-
 A C G T A C G T C G T A A C T G A C G T A C T G C G A T A C T G C G T A C G T A C A T G C T A G A T C G C G T A
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAGTGTGAADGGA----
-ACTATGAATGAATGAT
 A C G T C G T A A C T G A C G T A C T G C G A T A C T G C G T A C G T A C A T G C T A G A T C G C G T A A C G T A C G T A C G T A C G T
A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

MGA/MA0801.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TAGTGTGAADGGA
AGGTGTGA-----
 A C G T C G T A A C T G A C G T A C T G C G A T A C T G C G T A C G T A C A T G C T A G A T C G C G T A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAGTGTGAADGGA
AGGTGTTAAT---
 A C G T C G T A A C T G A C G T A C T G C G A T A C T G C G T A C G T A C A T G C T A G A T C G C G T A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T