p-value: | 1e-9 |
log p-value: | -2.156e+01 |
Information Content per bp: | 1.932 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.62% |
Number of Background Sequences with motif | 2.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 52.8 +/- 23.4bp |
Average Position of motif in Background | 52.2 +/- 11.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCTGCCAGGCGG --TTGCCAAG--- |
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INSM1/MA0155.1/Jaspar
Match Rank: | 2 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTCTGCCAGGCGG-- ---TGTCAGGGGGCG |
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PB0147.1_Max_2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCTGCCAGGCGG--- --GTGCCACGCGACTG |
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NFIC/MA0161.1/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTCTGCCAGGCGG ---TGCCAA---- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTCTGCCAGGCGG -CGTGCCAAG--- |
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TFAP2A(var.2)/MA0810.1/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTCTGCCAGGCGG-- ---TGCCCNGGGGCA |
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TFAP2B/MA0811.1/Jaspar
Match Rank: | 7 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTCTGCCAGGCGG-- ---TGCCCTNGGGCA |
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TFAP2C/MA0524.2/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTCTGCCAGGCGG-- ---TGCCCTNGGGCA |
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THAP1/MA0597.1/Jaspar
Match Rank: | 9 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCTGCCAGGCGG --CTGCCCGCA-- |
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Hic1/MA0739.1/Jaspar
Match Rank: | 10 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TTCTGCCAGGCGG --ATGCCAACC-- |
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