Information for 7-GAGAGCATGC (Motif 6)

A C T G C T G A T A C G C G T A A T C G A G T C C G T A C G A T A C T G G A T C
Reverse Opposite:
C T A G A G T C C G T A G C A T T C A G A T G C A C G T A T G C A G C T A G T C
p-value:1e-10
log p-value:-2.422e+01
Information Content per bp:1.840
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif144.9
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets43.8 +/- 21.8bp
Average Position of motif in Background51.6 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GAGAGCATGC----
--GCGCATGCGCAC
 A C T G C T G A T A C G C G T A A T C G A G T C C G T A C G A T A C T G G A T C A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGCATGC
CTTGAGTGGCT--
 A C G T A C G T A C G T A C T G C T G A T A C G C G T A A T C G A G T C C G T A C G A T A C T G G A T C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAGAGCATGC----
--GCGCATGCGCAG
 A C T G C T G A T A C G C G T A A T C G A G T C C G T A C G A T A C T G G A T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGCATGC
TTGAGTGSTT--
 A C G T A C G T A C T G C T G A T A C G C G T A A T C G A G T C C G T A C G A T A C T G G A T C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GAGAGCATGC
TTGACCGAGAATTCC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A T A C G C G T A A T C G A G T C C G T A C G A T A C T G G A T C
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T

NRF1/MA0506.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGAGCATGC---
--GCGCCTGCGCA
 A C T G C T G A T A C G C G T A A T C G A G T C C G T A C G A T A C T G G A T C A C G T A C G T A C G T
A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GAGAGCATGC
NNNACCGAGAGTNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A T A C G C G T A A T C G A G T C C G T A C G A T A C T G G A T C
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAGAGCATGC
BTBRAGTGSN---
 A C G T A C G T A C G T A C T G C T G A T A C G C G T A A T C G A G T C C G T A C G A T A C T G G A T C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GAGAGCATGC--
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C T G C T G A T A C G C G T A A T C G A G T C C G T A C G A T A C T G G A T C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GAGAGCATGC
GNNACCGAGAATNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T G A T A C G C G T A A T C G A G T C C G T A C G A T A C T G G A T C
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T A C G T