Information for 6-ATTTGCATGT (Motif 4)

G C T A G C A T A C G T C G A T T C A G G A T C G C T A C G A T C A T G G C A T
Reverse Opposite:
C G T A G T A C G C T A C G A T C T A G A G T C G C T A T G C A C G T A C G A T
p-value:1e-11
log p-value:-2.599e+01
Information Content per bp:1.651
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif5.96%
Number of Background Sequences with motif852.8
Percentage of Background Sequences with motif1.86%
Average Position of motif in Targets48.9 +/- 28.7bp
Average Position of motif in Background48.6 +/- 35.2bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---ATTTGCATGT
TTCATTTGCATAT
A C G T A C G T A C G T G C T A G C A T A C G T C G A T T C A G G A T C G C T A C G A T C A T G G C A T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:ATTTGCATGT
ATTTGCATAT
G C T A G C A T A C G T C G A T T C A G G A T C G C T A C G A T C A T G G C A T
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.88
Offset:0
Orientation:forward strand
Alignment:ATTTGCATGT
ATTTGCATAA
G C T A G C A T A C G T C G A T T C A G G A T C G C T A C G A T C A T G G C A T
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGCATGT
BTVATTWGCATA-
A C G T A C G T A C G T G C T A G C A T A C G T C G A T T C A G G A T C G C T A C G A T C A T G G C A T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGCATGT
CTCATTTGCATW-
A C G T A C G T A C G T G C T A G C A T A C G T C G A T T C A G G A T C G C T A C G A T C A T G G C A T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:ATTTGCATGT
ATTTGCATA-
G C T A G C A T A C G T C G A T T C A G G A T C G C T A C G A T C A T G G C A T
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:7
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-ATTTGCATGT-
AATTTGCATANT
A C G T G C T A G C A T A C G T C G A T T C A G G A T C G C T A C G A T C A T G G C A T A C G T
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:8
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGCATGT--
TNTAATTTGCATANNN
A C G T A C G T A C G T A C G T G C T A G C A T A C G T C G A T T C A G G A T C G C T A C G A T C A T G G C A T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGCATGT--
TNTAATTTGCATACNA
A C G T A C G T A C G T A C G T G C T A G C A T A C G T C G A T T C A G G A T C G C T A C G A T C A T G G C A T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.83
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGCATGT--
TNTAATTTGCATACNA
A C G T A C G T A C G T A C G T G C T A G C A T A C G T C G A T T C A G G A T C G C T A C G A T C A T G G C A T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A