p-value: | 1e-36 |
log p-value: | -8.494e+01 |
Information Content per bp: | 1.739 |
Number of Target Sequences with motif | 28.0 |
Percentage of Target Sequences with motif | 3.47% |
Number of Background Sequences with motif | 32.9 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 56.9 +/- 18.1bp |
Average Position of motif in Background | 45.1 +/- 24.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
Match Rank: | 1 |
Score: | 0.99 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | YGGTTGCCATGGCAAC CGGTTGCCATGGCAAC |
|
|
|
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
Match Rank: | 2 |
Score: | 0.98 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | YGGTTGCCATGGCAAC -KGTTGCCATGGCAAC |
|
|
|
RFX3/MA0798.1/Jaspar
Match Rank: | 3 |
Score: | 0.96 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | YGGTTGCCATGGCAAC- -CGTTGCCATGGCAACG |
|
|
|
RFX2/MA0600.2/Jaspar
Match Rank: | 4 |
Score: | 0.96 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | YGGTTGCCATGGCAAC- -CGTTGCCATGGCAACG |
|
|
|
RFX5/MA0510.2/Jaspar
Match Rank: | 5 |
Score: | 0.96 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | YGGTTGCCATGGCAAC- -NGTTGCCATGGCAACG |
|
|
|
Rfx1/MA0509.1/Jaspar
Match Rank: | 6 |
Score: | 0.95 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | YGGTTGCCATGGCAAC --GTTGCCATGGNAAC |
|
|
|
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 7 |
Score: | 0.94 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | YGGTTGCCATGGCAAC -NGTTGCCATGGCAA- |
|
|
|
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 8 |
Score: | 0.94 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | YGGTTGCCATGGCAAC -GGTTGCCATGGCAA- |
|
|
|
RFX4/MA0799.1/Jaspar
Match Rank: | 9 |
Score: | 0.93 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | YGGTTGCCATGGCAAC- -CGTTGCCATGGCAACG |
|
|
|
PB0055.1_Rfx4_1/Jaspar
Match Rank: | 10 |
Score: | 0.75 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -YGGTTGCCATGGCAAC NNCGTTGCTATGGNN-- |
|
|
|