Information for 1-NNRSCACGTGVBN (Motif 1)

T G A C T A G C T C A G A T G C A G T C C G T A A G T C T C A G A C G T A C T G T A C G A G T C A C G T
Reverse Opposite:
T G A C T C A G A T G C A G T C C G T A A G T C T C A G A C G T A C T G T A C G A G T C A C T G A C T G
p-value:1e-127
log p-value:-2.945e+02
Information Content per bp:1.564
Number of Target Sequences with motif287.0
Percentage of Target Sequences with motif35.61%
Number of Background Sequences with motif3015.4
Percentage of Background Sequences with motif6.59%
Average Position of motif in Targets51.7 +/- 22.1bp
Average Position of motif in Background51.2 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.96
Offset:2
Orientation:forward strand
Alignment:NNRSCACGTGVBN-
--ACCACGTGGTNN
 T G A C T A G C T C A G A T G C A G T C C G T A A G T C T C A G A C G T A C T G T A C G A G T C A C G T A C G T
A C G T A C G T T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.96
Offset:2
Orientation:forward strand
Alignment:NNRSCACGTGVBN
--GNCACGTG---
 T G A C T A G C T C A G A T G C A G T C C G T A A G T C T C A G A C G T A C T G T A C G A G T C A C G T
A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.96
Offset:1
Orientation:forward strand
Alignment:NNRSCACGTGVBN
-NNCCACGTGG--
 T G A C T A G C T C A G A T G C A G T C C G T A A G T C T C A G A C G T A C T G T A C G A G T C A C G T
A C G T T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:4
Score:0.95
Offset:2
Orientation:forward strand
Alignment:NNRSCACGTGVBN
--ACCACGTG---
 T G A C T A G C T C A G A T G C A G T C C G T A A G T C T C A G A C G T A C T G T A C G A G T C A C G T
A C G T A C G T T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:5
Score:0.95
Offset:2
Orientation:forward strand
Alignment:NNRSCACGTGVBN
--ACCACGTGCT-
 T G A C T A G C T C A G A T G C A G T C C G T A A G T C T C A G A C G T A C T G T A C G A G T C A C G T
A C G T A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.95
Offset:2
Orientation:forward strand
Alignment:NNRSCACGTGVBN
--GHCACGTG---
 T G A C T A G C T C A G A T G C A G T C C G T A A G T C T C A G A C G T A C T G T A C G A G T C A C G T
A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.94
Offset:2
Orientation:forward strand
Alignment:NNRSCACGTGVBN
--NVCACGTG---
 T G A C T A G C T C A G A T G C A G T C C G T A A G T C T C A G A C G T A C T G T A C G A G T C A C G T
A C G T A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.94
Offset:1
Orientation:forward strand
Alignment:NNRSCACGTGVBN
-NNCCACGTGG--
 T G A C T A G C T C A G A T G C A G T C C G T A A G T C T C A G A C G T A C T G T A C G A G T C A C G T
A C G T T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:9
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:NNRSCACGTGVBN
--NGCACGTGNT-
 T G A C T A G C T C A G A T G C A G T C C G T A A G T C T C A G A C G T A C T G T A C G A G T C A C G T
A C G T A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:10
Score:0.94
Offset:2
Orientation:forward strand
Alignment:NNRSCACGTGVBN
--GCCACGTG---
 T G A C T A G C T C A G A T G C A G T C C G T A A G T C T C A G A C G T A C T G T A C G A G T C A C G T
A C G T A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T