Information for 10-AGCACCTCAG (Motif 9)

C G T A T A C G A G T C G C T A A G T C G T A C C G A T A G T C C G T A A C T G
Reverse Opposite:
G T A C A C G T C T A G C G T A A C T G T C A G C G A T A C T G A T G C A C G T
p-value:1e-8
log p-value:-1.943e+01
Information Content per bp:1.839
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif249.1
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets56.3 +/- 27.6bp
Average Position of motif in Background51.0 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SREBF2/MA0596.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGCACCTCAG
ATCACCCCAT
 C G T A T A C G A G T C G C T A A G T C G T A C C G A T A G T C C G T A A C T G
C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AGCACCTCAG
ATCACCCCAC
 C G T A T A C G A G T C G C T A A G T C G T A C C G A T A G T C C G T A A C T G
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGCACCTCAG
TGACACCT---
 A C G T C G T A T A C G A G T C G C T A A G T C G T A C C G A T A G T C C G T A A C T G
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGCACCTCAG--
NWAACCACADNN
 C G T A T A C G A G T C G C T A A G T C G T A C C G A T A G T C C G T A A C T G A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCACCTCAG-
-AAACCACAGC
 C G T A T A C G A G T C G C T A A G T C G T A C C G A T A G T C C G T A A C T G A C G T
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGCACCTCAG
---ACGTCA-
 C G T A T A C G A G T C G C T A A G T C G T A C C G A T A G T C C G T A A C T G
A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGCACCTCAG
ATTAACACCT---
 A C G T A C G T A C G T C G T A T A C G A G T C G C T A A G T C G T A C C G A T A G T C C G T A A C T G
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AGCACCTCAG-
NNGGCGACACCTCNNN
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G A G T C G C T A A G T C G T A C C G A T A G T C C G T A A C T G A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGCACCTCAG
TCACACCT---
 A C G T C G T A T A C G A G T C G C T A A G T C G T A C C G A T A G T C C G T A A C T G
G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGCACCTCAG
TCACACCT---
 A C G T C G T A T A C G A G T C G C T A A G T C G T A C C G A T A G T C C G T A A C T G
G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T