Information for 21-GAGGACTAGCAACAGA (Motif 36)

A C T G C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G A C G T A C G T A C T G A G T C A C G T C G T A A C T G A C G T A G T C A G T C A C G T A G T C
p-value:1e-6
log p-value:-1.436e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 4.3bp
Average Position of motif in Background55.9 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GAGGACTAGCAACAGA
---SCCTAGCAACAG-
 A C T G C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAGGACTAGCAACAGA
TGTTKCCTAGCAACM--
 A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGGACTAGCAACAGA----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GAGGACTAGCAACAGA
-CCGCATAGCAACGGA
 A C T G C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A
A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PH0139.1_Pitx3/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGGACTAGCAACAGA
AGGGGGATTAGCTGCC--
 A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGGACTAGCAACAGA
GAGSCCGAGC------
 A C T G C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GAGGACTAGCAACAGA
------TTGCAACATN
 A C T G C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGGACTAGCAACAGA
AAGAGGATTAG-------
 A C G T A C G T A C T G C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGGACTAGCAACAGA
-TACCATAGCAACGGT
 A C T G C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A
A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

MEF2D/MA0773.1/Jaspar

Match Rank:10
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GAGGACTAGCAACAGA
----ACTATAAATAGA
 A C T G C G T A A C T G A C T G C G T A A G T C A C G T C G T A A C T G A G T C C G T A C G T A A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A