Information for 1-TAGCAGCACA (Motif 5)

G A C T C T G A C T A G T A G C C G T A T A C G G T A C G C T A A T G C G C T A
Reverse Opposite:
C G A T T A C G C G A T C A T G A G T C G C A T A T C G A G T C G A C T C T G A
p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.663
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif11.68%
Number of Background Sequences with motif511.6
Percentage of Background Sequences with motif4.30%
Average Position of motif in Targets55.5 +/- 22.8bp
Average Position of motif in Background48.7 +/- 39.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAGCAGCACA-------
-AGCGGCACACACGCAA
 G A C T C T G A C T A G T A G C C G T A T A C G G T A C G C T A A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TAGCAGCACA-------
-CGAAGCACACAAAATA
 G A C T C T G A C T A G T A G C C G T A T A C G G T A C G C T A A T G C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TAGCAGCACA
---CAGCC--
 G A C T C T G A C T A G T A G C C G T A T A C G G T A C G C T A A T G C G C T A
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TAGCAGCACA--
-GTCAGCANNTN
 G A C T C T G A C T A G T A G C C G T A T A C G G T A C G C T A A T G C G C T A A C G T A C G T
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TAGCAGCACA
TTGCAACATN
 G A C T C T G A C T A G T A G C C G T A T A C G G T A C G C T A A T G C G C T A
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TAGCAGCACA-
ADGGYAGYAGCATCT
 A C G T A C G T A C G T A C G T G A C T C T G A C T A G T A G C C G T A T A C G G T A C G C T A A T G C G C T A A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TAGCAGCACA
SCCTAGCAACAG-
 A C G T A C G T A C G T G A C T C T G A C T A G T A G C C G T A T A C G G T A C G C T A A T G C G C T A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TAGCAGCACA-
-GGGAGGACNG
 G A C T C T G A C T A G T A G C C G T A T A C G G T A C G C T A A T G C G C T A A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TAGCAGCACA--
CTGAGTCAGCAATTT
 A C G T A C G T A C G T G A C T C T G A C T A G T A G C C G T A T A C G G T A C G C T A A T G C G C T A A C G T A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

Rhox11/MA0629.1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TAGCAGCACA--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A C G T G A C T C T G A C T A G T A G C C G T A T A C G G T A C G C T A A T G C G C T A A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T