Information for 3-DSCACTGCTSTGGCTG (Motif 4)

C A T G A T C G A G T C C T G A A G T C C G A T A T C G T G A C C G A T A T G C C G A T A C T G C T A G A T G C A C G T A C T G
Reverse Opposite:
A G T C G T C A A T C G A G T C A G T C C G T A A T C G G C T A A C T G A T G C C G T A A C T G A G C T A C T G A T G C G T A C
p-value:1e-12
log p-value:-2.981e+01
Information Content per bp:1.746
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.46%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.2 +/- 23.1bp
Average Position of motif in Background73.2 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---DSCACTGCTSTGGCTG
AATCGCACTGCATTCCG--
 A C G T A C G T A C G T C A T G A T C G A G T C C T G A A G T C C G A T A T C G T G A C C G A T A T G C C G A T A C T G C T A G A T G C A C G T A C T G
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:DSCACTGCTSTGGCTG
CCCCCTGCTGTG----
 C A T G A T C G A G T C C T G A A G T C C G A T A T C G T G A C C G A T A T G C C G A T A C T G C T A G A T G C A C G T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--DSCACTGCTSTGGCTG
GGCCYCCTGCTGDGH---
 A C G T A C G T C A T G A T C G A G T C C T G A A G T C C G A T A T C G T G A C C G A T A T G C C G A T A C T G C T A G A T G C A C G T A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:4
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:DSCACTGCTSTGGCTG
-----TGCTGTGATTT
 C A T G A T C G A G T C C T G A A G T C C G A T A T C G T G A C C G A T A T G C C G A T A C T G C T A G A T G C A C G T A C T G
A C G T A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.50
Offset:9
Orientation:forward strand
Alignment:DSCACTGCTSTGGCTG-
---------TWGTCTGV
 C A T G A T C G A G T C C T G A A G T C C G A T A T C G T G A C C G A T A T G C C G A T A C T G C T A G A T G C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:DSCACTGCTSTGGCTG-----
------GGNGCGNCTGTTNNN
 C A T G A T C G A G T C C T G A A G T C C G A T A T C G T G A C C G A T A T G C C G A T A C T G C T A G A T G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:forward strand
Alignment:DSCACTGCTSTGGCTG
RSCACTYRAG------
 C A T G A T C G A G T C C T G A A G T C C G A T A T C G T G A C C G A T A T G C C G A T A C T G C T A G A T G C A C G T A C T G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:DSCACTGCTSTGGCTG
--CGCAGCTGCG----
 C A T G A T C G A G T C C T G A A G T C C G A T A T C G T G A C C G A T A T G C C G A T A C T G C T A G A T G C A C G T A C T G
A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:DSCACTGCTSTGGCTG
--CACAGCGGGGGGTC
 C A T G A T C G A G T C C T G A A G T C C G A T A T C G T G A C C G A T A T G C C G A T A C T G C T A G A T G C A C G T A C T G
A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:DSCACTGCTSTGGCTG
-NCGCAGCGGGGGGTC
 C A T G A T C G A G T C C T G A A G T C C G A T A T C G T G A C C G A T A T G C C G A T A C T G C T A G A T G C A C G T A C T G
A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C