Information for 8-GMGCAGCTCCAGC (Motif 18)

T A C G G T A C A T C G A T G C T G C A A T C G A G T C C G A T A T G C A T G C G T C A A C T G T A G C
Reverse Opposite:
A C T G A G T C C A G T A T C G A T C G G C T A C T A G T A G C A C G T A T C G T A G C A C T G A T G C
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.677
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif11.3
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets67.0 +/- 19.0bp
Average Position of motif in Background56.5 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GMGCAGCTCCAGC
-CGCAGCTGCG--
 T A C G G T A C A T C G A T G C T G C A A T C G A G T C C G A T A T G C A T G C G T C A A C T G T A G C
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GMGCAGCTCCAGC-
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T T A C G G T A C A T C G A T G C T G C A A T C G A G T C C G A T A T G C A T G C G T C A A C T G T A G C A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GMGCAGCTCCAGC
-AGCAGCTGCTNN
 T A C G G T A C A T C G A T G C T G C A A T C G A G T C C G A T A T G C A T G C G T C A A C T G T A G C
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GMGCAGCTCCAGC-
ADGGYAGYAGCATCT
 A C G T T A C G G T A C A T C G A T G C T G C A A T C G A G T C C G A T A T G C A T G C G T C A A C T G T A G C A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GMGCAGCTCCAGC
--NCAGCTGCTG-
 T A C G G T A C A T C G A T G C T G C A A T C G A G T C C G A T A T G C A T G C G T C A A C T G T A G C
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GMGCAGCTCCAGC
-AGCAGCTGCT--
 T A C G G T A C A T C G A T G C T G C A A T C G A G T C C G A T A T G C A T G C G T C A A C T G T A G C
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GMGCAGCTCCAGC
-GACAGCTGCAG-
 T A C G G T A C A T C G A T G C T G C A A T C G A G T C C G A T A T G C A T G C G T C A A C T G T A G C
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:9
Orientation:forward strand
Alignment:GMGCAGCTCCAGC-
---------CAGCC
 T A C G G T A C A T C G A T G C T G C A A T C G A G T C C G A T A T G C A T G C G T C A A C T G T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

POL011.1_XCPE1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GMGCAGCTCCAGC--
-----GGTCCCGCCC
 T A C G G T A C A T C G A T G C T G C A A T C G A G T C C G A T A T G C A T G C G T C A A C T G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GMGCAGCTCCAGC--
---SNGCACCTGCHS
 T A C G G T A C A T C G A T G C T G C A A T C G A G T C C G A T A T G C A T G C G T C A A C T G T A G C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C