Information for 7-ATKCCCYGGCRGCTCC (Motif 13)

T G C A A C G T A C G T A G T C A G T C A G T C A G C T C A T G A C T G G T A C C T G A A T C G A G T C C G A T A T G C G T A C
Reverse Opposite:
A C T G A T C G C G T A A C T G A T G C G A C T A C T G A G T C G T A C C T G A C T A G C T A G A C T G G T C A G T C A A C G T
p-value:1e-10
log p-value:-2.335e+01
Information Content per bp:1.704
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.82%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets58.6 +/- 22.9bp
Average Position of motif in Background35.8 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATKCCCYGGCRGCTCC
-TGCCCTGAGGGCA--
 T G C A A C G T A C G T A G T C A G T C A G T C A G C T C A T G A C T G G T A C C T G A A T C G A G T C C G A T A T G C G T A C
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATKCCCYGGCRGCTCC
-TGCCCTGAGGGCA--
 T G C A A C G T A C G T A G T C A G T C A G T C A G C T C A T G A C T G G T A C C T G A A T C G A G T C C G A T A T G C G T A C
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:ATKCCCYGGCRGCTCC
---SCCTAGCAACAG-
 T G C A A C G T A C G T A G T C A G T C A G T C A G C T C A T G A C T G G T A C C T G A A T C G A G T C C G A T A T G C G T A C
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ATKCCCYGGCRGCTCC
-TGCCCTGAGGGCA--
 T G C A A C G T A C G T A G T C A G T C A G T C A G C T C A T G A C T G G T A C C T G A A T C G A G T C C G A T A T G C G T A C
A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ATKCCCYGGCRGCTCC
-GGCTCYAKCAYC---
 T G C A A C G T A C G T A G T C A G T C A G T C A G C T C A T G A C T G G T A C C T G A A T C G A G T C C G A T A T G C G T A C
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ATKCCCYGGCRGCTCC
ACATGCCCGGGCAT----
 A C G T A C G T T G C A A C G T A C G T A G T C A G T C A G T C A G C T C A T G A C T G G T A C C T G A A T C G A G T C C G A T A T G C G T A C
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATKCCCYGGCRGCTCC
GTTGCCATGGCAAC---
 A C G T T G C A A C G T A C G T A G T C A G T C A G T C A G C T C A T G A C T G G T A C C T G A A T C G A G T C C G A T A T G C G T A C
C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATKCCCYGGCRGCTCC
CAGGCCNNGGCCNN---
 A C G T T G C A A C G T A C G T A G T C A G T C A G T C A G C T C A T G A C T G G T A C C T G A A T C G A G T C C G A T A T G C G T A C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ATKCCCYGGCRGCTCC
TTGCCATGGCAACN--
 T G C A A C G T A C G T A G T C A G T C A G T C A G C T C A T G A C T G G T A C C T G A A T C G A G T C C G A T A T G C G T A C
A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A A G T C T G A C A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-ATKCCCYGGCRGCTCC
ATTTCCCAGVAKSCY--
 A C G T T G C A A C G T A C G T A G T C A G T C A G T C A G C T C A T G A C T G G T A C C T G A A T C G A G T C C G A T A T G C G T A C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T