Information for 7-CCCTGCTGWG (Motif 9)

G A T C G T A C G A T C A G C T A C T G T A G C A C G T T A C G G C T A T A C G
Reverse Opposite:
A T G C C G A T A T G C T G C A A T C G T G A C T C G A C T A G C A T G C T A G
p-value:1e-11
log p-value:-2.589e+01
Information Content per bp:1.557
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.56%
Number of Background Sequences with motif820.8
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets48.7 +/- 25.2bp
Average Position of motif in Background50.5 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTGWG
CCCCCTGCTGTG
 A C G T A C G T G A T C G T A C G A T C A G C T A C T G T A G C A C G T T A C G G C T A T A C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.82
Offset:1
Orientation:forward strand
Alignment:CCCTGCTGWG-
-CCTGCTGAGH
 G A T C G T A C G A T C A G C T A C T G T A G C A C G T T A C G G C T A T A C G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.79
Offset:4
Orientation:forward strand
Alignment:CCCTGCTGWG
----GCTGTG
 G A T C G T A C G A T C A G C T A C T G T A G C A C G T T A C G G C T A T A C G
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTGWG---
TCNCCTGCTGNGNNN
 A C G T A C G T G A T C G T A C G A T C A G C T A C T G T A G C A C G T T A C G G C T A T A C G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTGWG---
TNTCCTGCTGTGNNG
 A C G T A C G T G A T C G T A C G A T C A G C T A C T G T A G C A C G T T A C G G C T A T A C G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----CCCTGCTGWG-
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T A C G T G A T C G T A C G A T C A G C T A C T G T A G C A C G T T A C G G C T A T A C G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--CCCTGCTGWG---
NNTCCTGCTGTGNNN
 A C G T A C G T G A T C G T A C G A T C A G C T A C T G T A G C A C G T T A C G G C T A T A C G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.74
Offset:3
Orientation:forward strand
Alignment:CCCTGCTGWG---
---TGCTGACTCA
 G A T C G T A C G A T C A G C T A C T G T A G C A C G T T A C G G C T A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CCCTGCTGWG
AATTTGCTGAC
 A C G T G A T C G T A C G A T C A G C T A C T G T A G C A C G T T A C G G C T A T A C G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:CCCTGCTGWG
---NGCTN--
 G A T C G T A C G A T C A G C T A C T G T A G C A C G T T A C G G C T A T A C G
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T