Information for 7-CCGGCTGTGACTG (Motif 8)

A G T C A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C T G C T G A A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G C T A G T C C G T A A G T C C G T A C T A G A G T C G T A C C T A G A C T G
p-value:1e-12
log p-value:-2.941e+01
Information Content per bp:1.889
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.9 +/- 30.5bp
Average Position of motif in Background48.4 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTGTGACTG
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C T G C T G A A G T C A C G T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTGTGACTG
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A G T C A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C T G C T G A A G T C A C G T A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCGGCTGTGACTG
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C T G C T G A A G T C A C G T A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCGGCTGTGACTG
NTGGGTGTGGCC-
 A G T C A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C T G C T G A A G T C A C G T A C T G
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCGGCTGTGACTG
CCTGCTGAGH---
 A G T C A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C T G C T G A A G T C A C G T A C T G
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTGTGACTG
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A G T C A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C T G C T G A A G T C A C G T A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCGGCTGTGACTG
-TGGGTGTGGC--
 A G T C A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C T G C T G A A G T C A C G T A C T G
A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTGTGACTG
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A G T C A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C T G C T G A A G T C A C G T A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCGGCTGTGACTG
--TGCTGTGATTT
 A G T C A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C T G C T G A A G T C A C G T A C T G
A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCGGCTGTGACTG
---GCAGTGATTT
 A G T C A G T C A C T G A C T G A G T C A C G T C T A G A C G T A C T G C T G A A G T C A C G T A C T G
A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T