Information for 13-GAAAACCCTA (Motif 19)

T A C G C T G A C G T A C G T A C T G A A G T C G T A C A G T C C A G T C T G A
Reverse Opposite:
A G C T G T C A C T A G A C T G A C T G A G C T C G A T A C G T A G C T A T G C
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.759
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.02%
Number of Background Sequences with motif339.6
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets46.6 +/- 28.8bp
Average Position of motif in Background49.5 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GAAAACCCTA
GGAAANCCCC-
 A C G T T A C G C T G A C G T A C G T A C T G A A G T C G T A C A G T C C A G T C T G A
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GAAAACCCTA
GGAAATCCCC-
 A C G T T A C G C T G A C G T A C G T A C T G A A G T C G T A C A G T C C A G T C T G A
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAAAACCCTA---
GCAAAACATTACTA
 A C G T T A C G C T G A C G T A C G T A C T G A A G T C G T A C A G T C C A G T C T G A A C G T A C G T A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAAAACCCTA
GGGAAATCCCCN
 A C G T A C G T T A C G C T G A C G T A C G T A C T G A A G T C G T A C A G T C C A G T C T G A
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAAAACCCTA
GGAAATTCCC-
 A C G T T A C G C T G A C G T A C G T A C T G A A G T C G T A C A G T C C A G T C T G A
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAAAACCCTA
-TAATCCCN-
 T A C G C T G A C G T A C G T A C T G A A G T C G T A C A G T C C A G T C T G A
A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAAAACCCTA
ACTGAAACCA---
 A C G T A C G T A C G T T A C G C T G A C G T A C G T A C T G A A G T C G T A C A G T C C A G T C T G A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAAACCCTA
CAAATCACTG
 T A C G C T G A C G T A C G T A C T G A A G T C G T A C A G T C C A G T C T G A
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GAAAACCCTA
GGGGGAATCCCC--
 A C G T A C G T A C G T A C G T T A C G C T G A C G T A C G T A C T G A A G T C G T A C A G T C C A G T C T G A
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAAAACCCTA
TGGAAAA-----
 A C G T A C G T T A C G C T G A C G T A C G T A C T G A A G T C G T A C A G T C C A G T C T G A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T