Information for 8-GAGAACAAAGGCC (Motif 10)

C T A G T C G A C A T G T C G A C G T A A G T C C T G A T G C A C G T A A C T G A T C G G A T C G A T C
Reverse Opposite:
C A T G C A T G A T G C A G T C C G A T A C G T A G C T A C T G A C G T A C G T G A T C A G C T A G T C
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.774
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif40.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets64.0 +/- 29.2bp
Average Position of motif in Background45.9 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--GAGAACAAAGGCC--
AGAAGAACAAAGGACTA
 A C G T A C G T C T A G T C G A C A T G T C G A C G T A A G T C C T G A T G C A C G T A A C T G A T C G G A T C G A T C A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:2
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GAGAACAAAGGCC
-GGAACAAAGR--
 C T A G T C G A C A T G T C G A C G T A A G T C C T G A T G C A C G T A A C T G A T C G G A T C G A T C
A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GAGAACAAAGGCC
-AAAACAAAGG--
 C T A G T C G A C A T G T C G A C G T A A G T C C T G A T G C A C G T A A C T G A T C G G A T C G A T C
A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:4
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--GAGAACAAAGGCC--
ATAAGAACAAAGGACTA
 A C G T A C G T C T A G T C G A C A T G T C G A C G T A A G T C C T G A T G C A C G T A A C T G A T C G G A T C G A T C A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:GAGAACAAAGGCC
---AACAAAGG--
 C T A G T C G A C A T G T C G A C G T A A G T C C T G A T G C A C G T A A C T G A T C G G A T C G A T C
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:GAGAACAAAGGCC
--GAACAATGGN-
 C T A G T C G A C A T G T C G A C G T A A G T C C T G A T G C A C G T A A C T G A T C G G A T C G A T C
A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GAGAACAAAGGCC
-AAAACAATGG--
 C T A G T C G A C A T G T C G A C G T A A G T C C T G A T G C A C G T A A C T G A T C G G A T C G A T C
A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GAGAACAAAGGCC
-VRRACAAWGG--
 C T A G T C G A C A T G T C G A C G T A A G T C C T G A T G C A C G T A A C T G A T C G G A T C G A T C
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:GAGAACAAAGGCC
---RACAAWGG--
 C T A G T C G A C A T G T C G A C G T A A G T C C T G A T G C A C G T A A C T G A T C G G A T C G A T C
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:10
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GAGAACAAAGGCC
--RAACAATGGN-
 C T A G T C G A C A T G T C G A C G T A A G T C C T G A T G C A C G T A A C T G A T C G G A T C G A T C
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T