Information for 9-CMAGGSSCTGWCA (Motif 9)

A G T C G T C A C T G A C T A G A C T G A T G C A T G C A G T C A C G T A C T G C G T A T A G C C G T A
Reverse Opposite:
A C G T A C T G C G A T A G T C C G T A A C T G A T C G A T C G A G T C A G T C A G C T A C G T A C T G
p-value:1e-10
log p-value:-2.357e+01
Information Content per bp:1.869
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets62.4 +/- 23.0bp
Average Position of motif in Background31.5 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0141.1_Pknox2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CMAGGSSCTGWCA----
-AAGCACCTGTCAATAT
 A G T C G T C A C T G A C T A G A C T G A T G C A T G C A G T C A C G T A C T G C G T A T A G C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:2
Score:0.70
Offset:5
Orientation:forward strand
Alignment:CMAGGSSCTGWCA--
-----VGCTGWCAVB
 A G T C G T C A C T G A C T A G A C T G A T G C A T G C A G T C A C G T A C T G C G T A T A G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:CMAGGSSCTGWCA-
------GCTGTCAA
 A G T C G T C A C T G A C T A G A C T G A T G C A T G C A G T C A C G T A C T G C G T A T A G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CMAGGSSCTGWCA----
-AATTACCTGTCAATAC
 A G T C G T C A C T G A C T A G A C T G A T G C A T G C A G T C A C G T A C T G C G T A T A G C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.65
Offset:7
Orientation:forward strand
Alignment:CMAGGSSCTGWCA--
-------YTGWCADY
 A G T C G T C A C T G A C T A G A C T G A T G C A T G C A G T C A C G T A C T G C G T A T A G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CMAGGSSCTGWCA-
------CCTGTCAA
 A G T C G T C A C T G A C T A G A C T G A T G C A T G C A G T C A C G T A C T G C G T A T A G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CMAGGSSCTGWCA----
-AAAGACCTGTCAATAC
 A G T C G T C A C T G A C T A G A C T G A T G C A T G C A G T C A C G T A C T G C G T A T A G C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0102.1_Meis1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CMAGGSSCTGWCA----
-AACGAGCTGTCAATAC
 A G T C G T C A C T G A C T A G A C T G A T G C A T G C A G T C A C G T A C T G C G T A T A G C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0140.1_Pknox1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CMAGGSSCTGWCA----
-AAAGACCTGTCAATCC
 A G T C G T C A C T G A C T A G A C T G A T G C A T G C A G T C A C G T A C T G C G T A T A G C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CMAGGSSCTGWCA-----
-NNNCAGCTGTCAATATN
 A G T C G T C A C T G A C T A G A C T G A T G C A T G C A G T C A C G T A C T G C G T A T A G C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C