Information for 8-GCCGTTGTCTCAG (Motif 7)

A T C G A G T C A G T C C T A G A G C T A C G T A C T G C G A T A T G C C G A T A G T C C G T A A C T G
Reverse Opposite:
A G T C C G A T A C T G C G T A A T C G C G T A A G T C C G T A C T G A G A T C C T A G A C T G A T G C
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.837
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.8 +/- 27.6bp
Average Position of motif in Background54.6 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GCCGTTGTCTCAG
NNNCCATTGTGTNAN
 A C G T A C G T A T C G A G T C A G T C C T A G A G C T A C G T A C T G C G A T A T G C C G A T A G T C C G T A A C T G
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCCGTTGTCTCAG
-CCTTTGTT----
 A T C G A G T C A G T C C T A G A G C T A C G T A C T G C G A T A T G C C G A T A G T C C G T A A C T G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GCCGTTGTCTCAG
-CCWTTGTY----
 A T C G A G T C A G T C C T A G A G C T A C G T A C T G C G A T A T G C C G A T A G T C C G T A A C T G
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCCGTTGTCTCAG
-CCATTGTTTT--
 A T C G A G T C A G T C C T A G A G C T A C G T A C T G C G A T A T G C C G A T A G T C C G T A A C T G
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCCGTTGTCTCAG
NCCATTGTTY---
 A T C G A G T C A G T C C T A G A G C T A C G T A C T G C G A T A T G C C G A T A G T C C G T A A C T G
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCCGTTGTCTCAG
-CCTTTGTTTT--
 A T C G A G T C A G T C C T A G A G C T A C G T A C T G C G A T A T G C C G A T A G T C C G T A A C T G
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCGTTGTCTCAG
-CCWTTGTYYB--
 A T C G A G T C A G T C C T A G A G C T A C G T A C T G C G A T A T G C C G A T A G T C C G T A A C T G
A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GCCGTTGTCTCAG
-CCATTGTTNY--
 A T C G A G T C A G T C C T A G A G C T A C G T A C T G C G A T A T G C C G A T A G T C C G T A A C T G
A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCGTTGTCTCAG
-CCATTGTTYB--
 A T C G A G T C A G T C C T A G A G C T A C G T A C T G C G A T A T G C C G A T A G T C C G T A A C T G
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:10
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GCCGTTGTCTCAG--
-----TGACTCAGCA
 A T C G A G T C A G T C C T A G A G C T A C G T A C T G C G A T A T G C C G A T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A