Information for 5-AAATTGCABGGCA (Motif 4)

C G T A C G T A C G T A G A C T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C A G T C T G A C A C G T A C T G A G T C G T C A C T G A C G A T A C G T A C G T
p-value:1e-13
log p-value:-3.015e+01
Information Content per bp:1.848
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 27.6bp
Average Position of motif in Background25.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----AAATTGCABGGCA
GAAAAAATTGCAAGG--
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A G A C T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A G T C C T G A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAATTGCABGGCA-----
-AATCGCACTGCATTCCG
 C G T A C G T A C G T A G A C T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AAATTGCABGGCA
TTCATTTGCATAT--
 A C G T A C G T C G T A C G T A C G T A G A C T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A G T C C T G A
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AAATTGCABGGCA
TNTAATTTGCATACNA
 A C G T A C G T A C G T C G T A C G T A C G T A G A C T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A G T C C T G A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---AAATTGCABGGCA
TNTAATTTGCATACNA
 A C G T A C G T A C G T C G T A C G T A C G T A G A C T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A G T C C T G A
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AAATTGCABGGCA
TNTAATTTGCATANNN
 A C G T A C G T A C G T C G T A C G T A C G T A G A C T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A G T C C T G A
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AAATTGCABGGCA
BTVATTWGCATA---
 A C G T A C G T C G T A C G T A C G T A G A C T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A G T C C T G A
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AAATTGCABGGCA
---WDNCTGGGCA
 C G T A C G T A C G T A G A C T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A G T C C T G A
A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAATTGCABGGCA---
-ATTTGCATAACAAAG
 C G T A C G T A C G T A G A C T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A G T C C T G A A C G T A C G T A C G T
A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAATTGCABGGCA---
-ATTTGCATAACAATG
 C G T A C G T A C G T A G A C T A C G T A C T G A G T C C G T A A C T G A C T G A C T G A G T C C T G A A C G T A C G T A C G T
A C G T G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G