Information for 9-GCGCACGAAG (Motif 16)

C T A G T A G C T A C G T G A C T C G A T G A C T C A G C G T A C G T A A C T G
Reverse Opposite:
T A G C G C A T G C A T A G T C A C T G A G C T A C T G A T G C A T C G G A T C
p-value:1e-8
log p-value:-2.044e+01
Information Content per bp:1.665
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif377.4
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets50.3 +/- 29.4bp
Average Position of motif in Background51.5 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCACGAAG-
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C G T A C G T C T A G T A G C T A C G T G A C T C G A T G A C T C A G C G T A C G T A A C T G A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GCGCACGAAG
ATAAAGGCGCGCGAT-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C T A C G T G A C T C G A T G A C T C A G C G T A C G T A A C T G
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGCACGAAG--
--GCACGTACCC
 C T A G T A G C T A C G T G A C T C G A T G A C T C A G C G T A C G T A A C T G A C G T A C G T
A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCGCACGAAG
-BGCACGTA-
 C T A G T A G C T A C G T G A C T C G A T G A C T C A G C G T A C G T A A C T G
A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCGCACGAAG
--GCACGTAY
 C T A G T A G C T A C G T G A C T C G A T G A C T C A G C G T A C G T A A C T G
A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GCGCACGAAG
ATAAGGGCGCGCGAT-
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C T A C G T G A C T C G A T G A C T C A G C G T A C G T A A C T G
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCGCACGAAG
--GCACGTNC
 C T A G T A G C T A C G T G A C T C G A T G A C T C A G C G T A C G T A A C T G
A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCGCACGAAG
ACGCCCACGCA-
 A C G T A C G T C T A G T A G C T A C G T G A C T C G A T G A C T C A G C G T A C G T A A C T G
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T

HINFP/MA0131.2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGCACGAAG
NCGCGGACGTTG
 A C G T A C G T C T A G T A G C T A C G T G A C T C G A T G A C T C A G C G T A C G T A A C T G
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

PB0208.1_Zscan4_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCGCACGAAG--
CGAAGCACACAAAATA
 A C G T A C G T A C G T A C G T C T A G T A G C T A C G T G A C T C G A T G A C T C A G C G T A C G T A A C T G A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A