Information for 4-GGAAGAMGGSKGSSCG (Motif 12)

A T C G A T C G G T C A C G T A A C T G C T G A G T A C A C T G A C T G A T G C A C T G A C T G A T G C A T C G A G T C A C T G
Reverse Opposite:
G T A C A C T G A T G C A T C G A G T C G T A C A T C G A G T C A G T C C A G T A G C T A G T C A C G T A C G T A T G C A T G C
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.853
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.2 +/- 31.9bp
Average Position of motif in Background52.4 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGAAGAMGGSKGSSCG
-CAAGATGGCGGC---
 A T C G A T C G G T C A C G T A A C T G C T G A G T A C A C T G A C T G A T G C A C T G A C T G A T G C A T C G A G T C A C T G
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.64
Offset:-7
Orientation:reverse strand
Alignment:-------GGAAGAMGGSKGSSCG
NNNNGGGGGAAGANGG-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T C G G T C A C G T A A C T G C T G A G T A C A C T G A C T G A T G C A C T G A C T G A T G C A T C G A G T C A C T G
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GGAAGAMGGSKGSSCG
-CAAGATGGCGGC---
 A T C G A T C G G T C A C G T A A C T G C T G A G T A C A C T G A C T G A T G C A C T G A C T G A T G C A T C G A G T C A C T G
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGAAGAMGGSKGSSCG
GGGNGGGGGCGGGGC-
 A T C G A T C G G T C A C G T A A C T G C T G A G T A C A C T G A C T G A T G C A C T G A C T G A T G C A T C G A G T C A C T G
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGAAGAMGGSKGSSCG
NGAAGC----------
 A T C G A T C G G T C A C G T A A C T G C T G A G T A C A C T G A C T G A T G C A C T G A C T G A T G C A T C G A G T C A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GGAAGAMGGSKGSSCG
ACCGGAAG-----------
 A C G T A C G T A C G T A T C G A T C G G T C A C G T A A C T G C T G A G T A C A C T G A C T G A T G C A C T G A C T G A T G C A T C G A G T C A C T G
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGAAGAMGGSKGSSCG
TGGAAAA----------
 A C G T A T C G A T C G G T C A C G T A A C T G C T G A G T A C A C T G A C T G A T G C A C T G A C T G A T G C A T C G A G T C A C T G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GGAAGAMGGSKGSSCG
AVCAGGAAGT----------
 A C G T A C G T A C G T A C G T A T C G A T C G G T C A C G T A A C T G C T G A G T A C A C T G A C T G A T G C A C T G A C T G A T G C A T C G A G T C A C T G
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ELF5/MA0136.2/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----GGAAGAMGGSKGSSCG
ACCCGGAAGTA---------
 A C G T A C G T A C G T A C G T A T C G A T C G G T C A C G T A A C T G C T G A G T A C A C T G A C T G A T G C A C T G A C T G A T G C A T C G A G T C A C T G
C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGAAGAMGGSKGSSCG
---RGKGGGCGGAGC-
 A T C G A T C G G T C A C G T A A C T G C T G A G T A C A C T G A C T G A T G C A C T G A C T G A T G C A T C G A G T C A C T G
A C G T A C G T A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T