Information for 4-GGSGMCAGAGTGC (Motif 6)

A C T G A T C G A T G C T A C G T G A C A G T C G C T A T C A G T C G A C T A G C A G T T C A G T G A C
Reverse Opposite:
A C T G A G T C G T C A G A T C A G C T A G T C C G A T A C T G A C T G A T G C T A C G A T G C A G T C
p-value:1e-12
log p-value:-2.766e+01
Information Content per bp:1.673
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif111.2
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets50.2 +/- 20.5bp
Average Position of motif in Background50.5 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GGSGMCAGAGTGC
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A T G C T A C G T G A C A G T C G C T A T C A G T C G A C T A G C A G T T C A G T G A C
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGSGMCAGAGTGC
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G A T G C T A C G T G A C A G T C G C T A T C A G T C G A C T A G C A G T T C A G T G A C
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGSGMCAGAGTGC
TTTGGCGCCAAA----
 A C G T A C G T A C G T A C T G A T C G A T G C T A C G T G A C A G T C G C T A T C A G T C G A C T A G C A G T T C A G T G A C
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T A C G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGSGMCAGAGTGC
ARGAGGMCAAAATGW
 A C G T A C G T A C T G A T C G A T G C T A C G T G A C A G T C G C T A T C A G T C G A C T A G C A G T T C A G T G A C
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGSGMCAGAGTGC
AGGTGNCAGACAG-
 A C G T A C T G A T C G A T G C T A C G T G A C A G T C G C T A T C A G T C G A C T A G C A G T T C A G T G A C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGSGMCAGAGTGC--
-CCGCCCAAGGGCAG
 A C T G A T C G A T G C T A C G T G A C A G T C G C T A T C A G T C G A C T A G C A G T T C A G T G A C A C G T A C G T
A C G T A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGSGMCAGAGTGC
AGGTGHCAGACA--
 A C G T A C T G A T C G A T G C T A C G T G A C A G T C G C T A T C A G T C G A C T A G C A G T T C A G T G A C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGSGMCAGAGTGC-
AGGGGTCAGAGGTCA
 A C G T A C T G A T C G A T G C T A C G T G A C A G T C G C T A T C A G T C G A C T A G C A G T T C A G T G A C A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGSGMCAGAGTGC
---AACAGATGGC
 A C T G A T C G A T G C T A C G T G A C A G T C G C T A T C A G T C G A C T A G C A G T T C A G T G A C
A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGSGMCAGAGTGC---
GGGGTCAAAGTCCAAT
 A C T G A T C G A T G C T A C G T G A C A G T C G C T A T C A G T C G A C T A G C A G T T C A G T G A C A C G T A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T