Information for 8-TTCAGGACCAYGG (Motif 16)

A C G T A G C T A G T C C G T A C T A G A T C G C G T A A G T C A G T C C G T A A G C T C T A G C T A G
Reverse Opposite:
A G T C A G T C C T G A A C G T A C T G A C T G A C G T A T G C A G T C A C G T A C T G C T G A G T C A
p-value:1e-9
log p-value:-2.117e+01
Information Content per bp:1.827
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif31.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.3 +/- 20.5bp
Average Position of motif in Background55.2 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTCAGGACCAYGG--------
TTCAGCACCATGGACAGCGCC
 A C G T A G C T A G T C C G T A C T A G A T C G C G T A A G T C A G T C C G T A A G C T C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTCAGGACCAYGG--------
-TCAGCACCATGGACAGCTCC
 A C G T A G C T A G T C C G T A C T A G A T C G C G T A A G T C A G T C C G T A A G C T C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGGACCAYGG
SCTGTCARCACC----
 A C G T A C G T A C G T A C G T A G C T A G T C C G T A C T A G A T C G C G T A A G T C A G T C C G T A A G C T C T A G C T A G
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTCAGGACCAYGG--
---NWAACCACADNN
 A C G T A G C T A G T C C G T A C T A G A T C G C G T A A G T C A G T C C G T A A G C T C T A G C T A G A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTCAGGACCAYGG----
CATAAGACCACCATTAC
 A C G T A G C T A G T C C G T A C T A G A T C G C G T A A G T C A G T C C G T A A G C T C T A G C T A G A C G T A C G T A C G T A C G T
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTCAGGACCAYGG
---AAAACAATGG
 A C G T A G C T A G T C C G T A C T A G A T C G C G T A A G T C A G T C C G T A A G C T C T A G C T A G
A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTCAGGACCAYGG-
----AAACCACAGC
 A C G T A G C T A G T C C G T A C T A G A T C G C G T A A G T C A G T C C G T A A G C T C T A G C T A G A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGGACCAYGG
TGAGTCAGCA------
 A C G T A C G T A C G T A C G T A G C T A G T C C G T A C T A G A T C G C G T A A G T C A G T C C G T A A G C T C T A G C T A G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TTCAGGACCAYGG
NTCAAGGTCA---
 A C G T A G C T A G T C C G T A C T A G A T C G C G T A A G T C A G T C C G T A A G C T C T A G C T A G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TTCAGGACCAYGG
CTGAGTCAGCAATTT--
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C C G T A C T A G A T C G C G T A A G T C A G T C C G T A A G C T C T A G C T A G
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T