p-value: | 1e-9 |
log p-value: | -2.199e+01 |
Information Content per bp: | 1.697 |
Number of Target Sequences with motif | 26.0 |
Percentage of Target Sequences with motif | 2.93% |
Number of Background Sequences with motif | 302.3 |
Percentage of Background Sequences with motif | 0.64% |
Average Position of motif in Targets | 52.0 +/- 25.2bp |
Average Position of motif in Background | 49.0 +/- 29.6bp |
Strand Bias (log2 ratio + to - strand density) | -1.4 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0106.1_Arid5a_2/Jaspar
Match Rank: | 1 |
Score: | 0.70 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTTGTATTG---- TNNTTTCGTATTNNANN |
|
|
|
HOXA13/MA0650.1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTTGTATTG- -TTTTTATTGG |
|
|
|
HOXB13/MA0901.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTTGTATTG- -NTTTTATTGG |
|
|
|
HOXD13/MA0909.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | CCTTGTATTG- -NTTTTATTGG |
|
|
|
PH0078.1_Hoxd13/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTTGTATTG---- NNANTTTTATTGGNNN |
|
|
|
CDX1/MA0878.1/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTTGTATTG- --TTTTATTGC |
|
|
|
PH0057.1_Hoxb13/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CCTTGTATTG---- NNAATTTTATTGGNTN |
|
|
|
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTTGTATTG-- --TTTTATTRGN |
|
|
|
CDX2/MA0465.1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | CCTTGTATTG--- --TTTTATGGCTN |
|
|
|
PH0075.1_Hoxd10/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---CCTTGTATTG---- NTNAATTTTATTGNATT |
|
|
|