Information for 5-AGGACACTYCAAG (Motif 7)

C G T A C A T G A C T G T G C A A G T C G C T A A G T C A C G T A G T C A G T C C G T A C T G A A T C G
Reverse Opposite:
A T G C A G C T A C G T C T A G T C A G C G T A C T A G C A G T A C T G A C G T A G T C G A T C A C G T
p-value:1e-12
log p-value:-2.796e+01
Information Content per bp:1.827
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif22.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets60.5 +/- 26.6bp
Average Position of motif in Background51.0 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-8/MA0673.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGGACACTYCAAG
---CCACTTGAA-
 C G T A C A T G A C T G T G C A A G T C G C T A A G T C A C G T A G T C A G T C C G T A C T G A A T C G
A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AGGACACTYCAAG
--RSCACTYRAG-
 C G T A C A T G A C T G T G C A A G T C G C T A A G T C A C G T A G T C A G T C C G T A C T G A A T C G
A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGGACACTYCAAG
--NSCACTYVAV-
 C G T A C A T G A C T G T G C A A G T C G C T A A G T C A C G T A G T C A G T C C G T A C T G A A T C G
A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGGACACTYCAAG
-AASCACTCAA--
 C G T A C A T G A C T G T G C A A G T C G C T A A G T C A C G T A G T C A G T C C G T A C T G A A T C G
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGACACTYCAAG---
AATCGCACTGCATTCCG
 A C G T C G T A C A T G A C T G T G C A A G T C G C T A A G T C A C G T A G T C A G T C C G T A C T G A A T C G A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PH0113.1_Nkx2-4/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGACACTYCAAG--
TAAGCCACTTGAAATT
 A C G T C G T A C A T G A C T G T G C A A G T C G C T A A G T C A C G T A G T C A G T C C G T A C T G A A T C G A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGACACTYCAAG
-MRSCACTYAA--
 C G T A C A T G A C T G T G C A A G T C G C T A A G T C A C G T A G T C A G T C C G T A C T G A A T C G
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGACACTYCAAG--
TAAGCCACTTGAATTT
 A C G T C G T A C A T G A C T G T G C A A G T C G C T A A G T C A C G T A G T C A G T C C G T A C T G A A T C G A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGACACTYCAAG
AAGGTCAC------
 A C G T C G T A C A T G A C T G T G C A A G T C G C T A A G T C A C G T A G T C A G T C C G T A C T G A A T C G
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGGACACTYCAAG
--ACCACTTGAA-
 C G T A C A T G A C T G T G C A A G T C G C T A A G T C A C G T A G T C A G T C C G T A C T G A A T C G
A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T