Information for 18-GTSGCCTGTSAGT (Motif 21)

A C T G A C G T A T C G A C T G A G T C A G T C A C G T A C T G A C G T A T G C G T C A A C T G A C G T
Reverse Opposite:
C G T A A G T C C A G T A T C G G T C A A G T C C G T A A C T G A C T G A G T C A T G C C G T A G T A C
p-value:1e-5
log p-value:-1.357e+01
Information Content per bp:1.912
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 29.8bp
Average Position of motif in Background51.2 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GTSGCCTGTSAGT--
---GSCTGTCACTCA
 A C T G A C G T A T C G A C T G A G T C A G T C A C G T A C T G A C G T A T G C G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

PH0141.1_Pknox2/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTSGCCTGTSAGT--
AAGCACCTGTCAATAT
 A C G T A C T G A C G T A T C G A C T G A G T C A G T C A C G T A C T G A C G T A T G C G T C A A C T G A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GTSGCCTGTSAGT
---VGCTGWCAVB
 A C T G A C G T A T C G A C T G A G T C A G T C A C G T A C T G A C G T A T G C G T C A A C T G A C G T
A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MEIS2/MA0774.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTSGCCTGTSAGT
----GCTGTCAA-
 A C T G A C G T A T C G A C T G A G T C A G T C A C G T A C T G A C G T A T G C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTSGCCTGTSAGT---
----NCTGTCAATCAN
 A C T G A C G T A T C G A C T G A G T C A G T C A C G T A C T G A C G T A T G C G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GTSGCCTGTSAGT
----GCTGTG---
 A C T G A C G T A T C G A C T G A G T C A G T C A C G T A C T G A C G T A T G C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTSGCCTGTSAGT
NNGTCGCGTGNCAC-
 A C G T A C G T A C T G A C G T A T C G A C T G A G T C A G T C A C G T A C T G A C G T A T G C G T C A A C T G A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTSGCCTGTSAGT--
AAAGACCTGTCAATCC
 A C G T A C T G A C G T A T C G A C T G A G T C A G T C A C G T A C T G A C G T A T G C G T C A A C T G A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTSGCCTGTSAGT
GTGGCGTGACNG-
 A C T G A C G T A T C G A C T G A G T C A G T C A C G T A C T G A C G T A T G C G T C A A C T G A C G T
T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GTSGCCTGTSAGT
-----NTGTCAN-
 A C T G A C G T A T C G A C T G A G T C A G T C A C G T A C T G A C G T A T G C G T C A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T