Information for 16-GTRGACYCTGCKY (Motif 24)

A C T G A C G T C T A G A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A G T C
Reverse Opposite:
C T A G G T C A A C T G A G T C C G T A A C T G C T A G A C T G A C G T A G T C A G T C C G T A A G T C
p-value:1e-4
log p-value:-1.062e+01
Information Content per bp:1.884
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.3 +/- 23.9bp
Average Position of motif in Background37.2 +/- 4.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTRGACYCTGCKY----
-TGGACTTTGNNCTNTG
 A C T G A C G T C T A G A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTRGACYCTGCKY---
-TGGACTTTGNNCTCN
 A C T G A C G T C T A G A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GTRGACYCTGCKY
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C T G A C G T C T A G A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A G T C
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTRGACYCTGCKY
GTGGAT-------
 A C T G A C G T C T A G A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A G T C
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTRGACYCTGCKY
NCGCGGACGTTG---
 A C G T A C G T A C T G A C G T C T A G A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A G T C
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GTRGACYCTGCKY-
NNCNTGACCCCGCTCT
 A C G T A C G T A C T G A C G T C T A G A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GTRGACYCTGCKY
-AAGACCCYYN--
 A C T G A C G T C T A G A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A G T C
A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTRGACYCTGCKY-
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A C T G A C G T C T A G A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTRGACYCTGCKY--
ATTGGACTTTGACCCC
 A C G T A C T G A C G T C T A G A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GTRGACYCTGCKY-
NNNNTGACCCGGCGCG
 A C G T A C G T A C T G A C G T C T A G A C T G C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A G T C A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G