Information for 13-TGACATAGTTTGG (Motif 22)

A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A C G T A A G T C A C G T C G T A A C G T A C T G A C G T A G T C C G T A
p-value:1e-7
log p-value:-1.654e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 35.9bp
Average Position of motif in Background77.2 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGACATAGTTTGG
TGACCTARTT---
 A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C T G A C T G
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TGACATAGTTTGG
TTGACCTANTTATN
 A C G T A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C T G A C T G
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGACATAGTTTGG
TTGACAG-------
 A C G T A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C T G A C T G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGACATAGTTTGG---
TCGCGAAGGTTGTACT
 A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C T G A C T G A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGACATAGTTTGG
TGACCTTGAT---
 A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C T G A C T G
A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGACATAGTTTGG
ARNTGACA--------
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C T G A C T G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TGACATAGTTTGG
TTGACAGG------
 A C G T A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C T G A C T G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGACATAGTTTGG
YTGWCADY------
 A C G T A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C T G A C T G
G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGACATAGTTTGG
-GACATATGTT--
 A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C T G A C T G
A C G T C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGACATAGTTTGG
ATGACGTA------
 A C G T A C G T A C T G C G T A A G T C C G T A A C G T C G T A A C T G A C G T A C G T A C G T A C T G A C T G
T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T A C G T A C G T A C G T A C G T A C G T