Information for 11-GAACTATACA (Motif 17)

A C T G C G T A C T G A A G T C G A C T G T C A A C G T T C G A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T G T C A A C G T C T G A A C T G A G C T A C G T A G T C
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.863
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif16.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.6 +/- 28.0bp
Average Position of motif in Background56.7 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GAACTATACA--
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T G A A G T C G A C T G T C A A C G T T C G A A G T C C G T A A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GAACTATACA--
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C G T A C T G C G T A C T G A A G T C G A C T G T C A A C G T T C G A A G T C C G T A A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAACTATACA-
TGAATTATGCAT
 A C G T A C T G C G T A C T G A A G T C G A C T G T C A A C G T T C G A A G T C C G T A A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GAACTATACA---
TNNAGAACAATANATNN
 A C G T A C G T A C G T A C G T A C T G C G T A C T G A A G T C G A C T G T C A A C G T T C G A A G T C C G T A A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0065.1_Sox15_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAACTATACA---
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C G T A C T G C G T A C T G A A G T C G A C T G T C A A C G T T C G A A G T C C G T A A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----GAACTATACA--
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C G T A C T G C G T A C T G A A G T C G A C T G T C A A C G T T C G A A G T C C G T A A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GAACTATACA------
AATAAAGAACAATAGAATTTCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T G A A G T C G A C T G T C A A C G T T C G A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GAACTATACA--
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T G A A G T C G A C T G T C A A C G T T C G A A G T C C G T A A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

SOX9/MA0077.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAACTATACA
GAACAATGG-
 A C T G C G T A C T G A A G T C G A C T G T C A A C G T T C G A A G T C C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GAACTATACA-
TCATGAATWATTCAT
 A C G T A C G T A C G T A C G T A C T G C G T A C T G A A G T C G A C T G T C A A C G T T C G A A G T C C G T A A C G T
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T