Information for 12-GAGCCTCCTAGTG (Motif 8)

A C T G G T C A A C T G T A G C A G T C A C G T A G T C A T G C A G C T C G T A C A T G A C G T A C T G
Reverse Opposite:
A G T C G T C A G A T C A C G T C T G A A T C G A C T G G T C A A C T G A C T G G T A C A C G T G T A C
p-value:1e-9
log p-value:-2.275e+01
Information Content per bp:1.801
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.3 +/- 29.5bp
Average Position of motif in Background65.3 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF/MA0139.1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGCCTCCTAGTG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C T G G T C A A C T G T A G C A G T C A C G T A G T C A T G C A G C T C G T A C A T G A C G T A C T G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GAGCCTCCTAGTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A A C T G T A G C A G T C A C G T A G T C A T G C A G C T C G T A C A T G A C G T A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GAGCCTCCTAGTG----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C T G G T C A A C T G T A G C A G T C A C G T A G T C A T G C A G C T C G T A C A T G A C G T A C T G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGCCTCCTAGTG-
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A C T G G T C A A C T G T A G C A G T C A C G T A G T C A T G C A G C T C G T A C A T G A C G T A C T G A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAGCCTCCTAGTG-
GATAACATCCTAGTAG
 A C G T A C G T A C T G G T C A A C T G T A G C A G T C A C G T A G T C A T G C A G C T C G T A C A T G A C G T A C T G A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G

Znf423/MA0116.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GAGCCTCCTAGTG----
--GGCACCCAGGGGTGC
 A C T G G T C A A C T G T A G C A G T C A C G T A G T C A T G C A G C T C G T A C A T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:forward strand
Alignment:GAGCCTCCTAGTG---
--GCCGCGCAGTGCGT
 A C T G G T C A A C T G T A G C A G T C A C G T A G T C A T G C A G C T C G T A C A T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GAGCCTCCTAGTG----
-NNNNTGCCAGTGATTG
 A C T G G T C A A C T G T A G C A G T C A C G T A G T C A T G C A G C T C G T A C A T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:GAGCCTCCTAGTG
AAGACCCYYN---
 A C T G G T C A A C T G T A G C A G T C A C G T A G T C A T G C A G C T C G T A C A T G A C G T A C T G
T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GAGCCTCCTAGTG--
AGGAGACCCCCAATTTG
 A C G T A C G T A C T G G T C A A C T G T A G C A G T C A C G T A G T C A T G C A G C T C G T A C A T G A C G T A C T G A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G