Information for 14-GCAGCCGCAGAGT (Motif 12)

A T C G A G T C G T C A A C T G A G T C A G T C A C T G A G T C C T G A A C T G C G T A A T C G A C G T
Reverse Opposite:
C G T A A T G C A C G T A G T C A G C T A C T G A G T C A C T G A C T G A G T C A C G T A C T G T A G C
p-value:1e-8
log p-value:-1.943e+01
Information Content per bp:1.932
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.7 +/- 22.6bp
Average Position of motif in Background35.3 +/- 5.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGCCGCAGAGT
NNNNAGCAGCTGCTGAN-
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C G T C A A C T G A G T C A G T C A C T G A G T C C T G A A C T G C G T A A T C G A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCAGCCGCAGAGT
NCAGCTGCTG---
 A T C G A G T C G T C A A C T G A G T C A G T C A C T G A G T C C T G A A C T G C G T A A T C G A C G T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCGCAGAGT
CGCAGCTGCG----
 A C G T A T C G A G T C G T C A A C T G A G T C A G T C A C T G A G T C C T G A A C T G C G T A A T C G A C G T
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCCGCAGAGT
GCGCATGCGCAG---
 A C G T A C G T A T C G A G T C G T C A A C T G A G T C A G T C A C T G A G T C C T G A A C T G C G T A A T C G A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCGCAGAGT
GACAGCTGCAG---
 A C G T A T C G A G T C G T C A A C T G A G T C A G T C A C T G A G T C C T G A A C T G C G T A A T C G A C G T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCGCAGAGT
AGCAGCTGCTNN--
 A C G T A T C G A G T C G T C A A C T G A G T C A G T C A C T G A G T C C T G A A C T G C G T A A T C G A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCAGCCGCAGAGT
-AAACCGCAAA--
 A T C G A G T C G T C A A C T G A G T C A G T C A C T G A G T C C T G A A C T G C G T A A T C G A C G T
A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCGCAGAGT
AACAGCTGCAG---
 A C G T A T C G A G T C G T C A A C T G A G T C A G T C A C T G A G T C C T G A A C T G C G T A A T C G A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GCAGCCGCAGAGT
-AAACCACAGAN-
 A T C G A G T C G T C A A C T G A G T C A G T C A C T G A G T C C T G A A C T G C G T A A T C G A C G T
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCGCAGAGT
AGCAGCTGCT----
 A C G T A T C G A G T C G T C A A C T G A G T C A G T C A C T G A G T C C T G A A C T G C G T A A T C G A C G T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T