Information for 6-TTGTGCCGAG (Motif 9)

A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C T G A C T G A G T C C G T A A G T C C G T A C G T A
p-value:1e-5
log p-value:-1.235e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 15.5bp
Average Position of motif in Background70.3 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTGTGCCGAG-
-GGTGCCAAGT
 A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTGTGCCGAG---
---TGCCCAGNHW
 A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TTGTGCCGAG
CTGTTCCTGG
 A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTGTGCCGAG
CCATTGTTNY---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C T G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TTGTGCCGAG-
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TTGTGCCGAG-
--ATGCCCACC
 A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C G T
A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0173.1_Sox21_2/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TTGTGCCGAG-
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTGTGCCGAG
CCWTTGTYYB---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGCCGAG----
AAANTGCTGACTNAG
 A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TTGTGCCGAG
YCTTTGTTCC---
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C A G T C A C T G C G T A A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T