Information for 9-CAGAGTCACAGTC (Motif 4)

A T G C C G T A A T C G C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C G T A C T G A C G T A C T G G T C A A G T C A C G T A T G C C G A T A T C G
p-value:1e-8
log p-value:-1.945e+01
Information Content per bp:1.913
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.6 +/- 20.5bp
Average Position of motif in Background51.0 +/- 9.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CAGAGTCACAGTC
-TGAGTGACAGSC
 A T G C C G T A A T C G C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Hnf4a/MA0114.3/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGAGTCACAGTC----
-GGGGTCAAAGTCCAAT
 A T G C C G T A A T C G C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

FOSL1/MA0477.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGTCACAGTC
NATGAGTCACC---
 A C G T A T G C C G T A A T C G C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C
A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGAGTCACAGTC
-TGAGTCA-----
 A T G C C G T A A T C G C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C
A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGAGTCACAGTC
TGCTGAGTCATNNTG
 A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CAGAGTCACAGTC-----
----GTCACGCTCNCTGA
 A T G C C G T A A T C G C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGAGTCACAGTC
NTGATTGACAGN-
 A T G C C G T A A T C G C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CAGAGTCACAGTC
------CACAGN-
 A T G C C G T A A T C G C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGAGTCACAGTC
TGCTGAGTCA-----
 A C G T A C G T A T G C C G T A A T C G C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CAGAGTCACAGTC
GATGAGTCAT----
 A C G T A T G C C G T A A T C G C G T A A C T G A C G T A G T C C G T A A G T C C G T A A C T G A C G T A G T C
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T A C G T A C G T A C G T