Information for 5-GCCAGYAGGTGTGGCT (Motif 9)

C A T G A T G C A T G C G T C A A C T G A G C T C G T A A C T G A T C G A C G T A T C G G C A T A C T G A C T G G A T C A C G T
Reverse Opposite:
C G T A C A T G A G T C G T A C C G T A A T G C G T C A A T G C G T A C A C G T T C G A G T A C A C G T A T C G A T C G G T A C
p-value:1e-10
log p-value:-2.304e+01
Information Content per bp:1.742
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.0 +/- 12.1bp
Average Position of motif in Background49.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:GCCAGYAGGTGTGGCT
-----CAGGTGAGG--
 C A T G A T G C A T G C G T C A A C T G A G C T C G T A A C T G A T C G A C G T A T C G G C A T A C T G A C T G G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GCCAGYAGGTGTGGCT-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T C A T G A T G C A T G C G T C A A C T G A G C T C G T A A C T G A T C G A C G T A T C G G C A T A C T G A C T G G A T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GCCAGYAGGTGTGGCT--
--GCGGAGGTGTCGCCTC
 C A T G A T G C A T G C G T C A A C T G A G C T C G T A A C T G A T C G A C G T A T C G G C A T A C T G A C T G G A T C A C G T A C G T A C G T
A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCCAGYAGGTGTGGCT
--SDGCAGGTGCNS--
 C A T G A T G C A T G C G T C A A C T G A G C T C G T A A C T G A T C G A C G T A T C G G C A T A C T G A C T G G A T C A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCCAGYAGGTGTGGCT
---NNCAGGTGCG---
 C A T G A T G C A T G C G T C A A C T G A G C T C G T A A C T G A T C G A C G T A T C G G C A T A C T G A C T G G A T C A C G T
A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCCAGYAGGTGTGGCT
---NNCAGGTGTN---
 C A T G A T G C A T G C G T C A A C T G A G C T C G T A A C T G A T C G A C G T A T C G G C A T A C T G A C T G G A T C A C G T
A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GCCAGYAGGTGTGGCT
------AGGTGTGA--
 C A T G A T G C A T G C G T C A A C T G A G C T C G T A A C T G A T C G A C G T A T C G G C A T A C T G A C T G G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:GCCAGYAGGTGTGGCT
---NNCAGGTGNN---
 C A T G A T G C A T G C G T C A A C T G A G C T C G T A A C T G A T C G A C G T A T C G G C A T A C T G A C T G G A T C A C G T
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GCCAGYAGGTGTGGCT-
-------NNTGTGGTTT
 C A T G A T G C A T G C G T C A A C T G A G C T C G T A A C T G A T C G A C G T A T C G G C A T A C T G A C T G G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GCCAGYAGGTGTGGCT
-----TGGGTGTGGC-
 C A T G A T G C A T G C G T C A A C T G A G C T C G T A A C T G A T C G A C G T A T C G G C A T A C T G A C T G G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T