p-value: | 1e-9 |
log p-value: | -2.218e+01 |
Information Content per bp: | 1.639 |
Number of Target Sequences with motif | 28.0 |
Percentage of Target Sequences with motif | 3.56% |
Number of Background Sequences with motif | 394.7 |
Percentage of Background Sequences with motif | 0.82% |
Average Position of motif in Targets | 42.8 +/- 24.8bp |
Average Position of motif in Background | 49.0 +/- 29.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.04 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCTGTTRCCA--- -CTGTTGCTAGGS |
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NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | TCTGTTRCCA-- ----TTGCCAAG |
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NFIC/MA0161.1/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | TCTGTTRCCA- -----TGCCAA |
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NFIX/MA0671.1/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCTGTTRCCA-- ---CGTGCCAAG |
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NFIA/MA0670.1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TCTGTTRCCA--- ---GGTGCCAAGT |
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NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TCTGTTRCCA-- --ATTTTCCATT |
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Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCTGTTRCCA -CTGTTTAC- |
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Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | TCTGTTRCCA-- --HTTTCCCASG |
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Spz1/MA0111.1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TCTGTTRCCA- GCTGTTACCCT |
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PB0109.1_Bbx_2/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCTGTTRCCA---- NNNNCTGTTAACNNTNN |
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