Information for 8-CTGCTGYTCTCGA (Motif 5)

A G T C A C G T A C T G A G T C C G A T A C T G A G T C C G A T A G T C C G A T A T G C A C T G G C T A
Reverse Opposite:
C G A T T G A C A T C G C G T A A C T G C G T A C T A G A G T C C G T A A C T G A G T C C G T A A C T G
p-value:1e-10
log p-value:-2.408e+01
Information Content per bp:1.853
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif26.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets44.5 +/- 27.3bp
Average Position of motif in Background46.1 +/- 33.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGCTGYTCTCGA
CAGCTGNT-----
 A G T C A C G T A C T G A G T C C G A T A C T G A G T C C G A T A G T C C G A T A T G C A C T G G C T A
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGYTCTCGA
NNAGCAGCTGCT-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G A T A C T G A G T C C G A T A G T C C G A T A T G C A C T G G C T A
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGYTCTCGA
NNTCCTGCTGTGNNN--
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G A T A C T G A G T C C G A T A G T C C G A T A T G C A C T G G C T A
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTGCTGYTCTCGA
CAGCTGTT-----
 A G T C A C G T A C T G A G T C C G A T A C T G A G T C C G A T A G T C C G A T A T G C A C T G G C T A
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGCTGYTCTCGA
AGCAGCTGCT-----
 A C G T A C G T A G T C A C G T A C T G A G T C C G A T A C T G A G T C C G A T A G T C C G A T A T G C A C T G G C T A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTGYTCTCGA
CAGCAGCTGN------
 A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G A T A C T G A G T C C G A T A G T C C G A T A T G C A C T G G C T A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGCTGYTCTCGA
ACAGCTGTTV----
 A C G T A G T C A C G T A C T G A G T C C G A T A C T G A G T C C G A T A G T C C G A T A T G C A C T G G C T A
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CTGCTGYTCTCGA
CCCCCTGCTGTG-----
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G A T A C T G A G T C C G A T A G T C C G A T A T G C A C T G G C T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTGCTGYTCTCGA
CTCAGCAGCTGCTACTG-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C C G A T A C T G A G T C C G A T A G T C C G A T A T G C A C T G G C T A
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGCTGYTCTCGA
TGCAGCTGTCCCT--
 A C G T A C G T A G T C A C G T A C T G A G T C C G A T A C T G A G T C C G A T A G T C C G A T A T G C A C T G G C T A
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T A C G T