Information for 11-CTGTAATTACAGC (Motif 10)

T G A C G C A T A T C G A G C T G T C A C T G A A G C T A G C T T C G A A T G C C G T A A C T G T G A C
Reverse Opposite:
A C T G T A G C C G A T T A C G A G C T T C G A T C G A G A C T A C G T C T G A T A G C C G T A A C T G
p-value:1e-6
log p-value:-1.414e+01
Information Content per bp:1.540
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.38%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.4 +/- 12.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CTGTAATTACAGC-----
-TCNCTTTACAGCGNNNT
 T G A C G C A T A T C G A G C T G T C A C T G A A G C T A G C T T C G A A T G C C G T A A C T G T G A C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGTAATTACAGC-----
-TCNNTTTACAGCGNNNT
 T G A C G C A T A T C G A G C T G T C A C T G A A G C T A G C T T C G A A T G C C G T A A C T G T G A C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGTAATTACAGC-----
-TCNNTTTACAGCGNNNT
 T G A C G C A T A T C G A G C T G T C A C T G A A G C T A G C T T C G A A T G C C G T A A C T G T G A C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTGTAATTACAGC--
NNNGGTAATTATNGNGN
 A C G T A C G T T G A C G C A T A T C G A G C T G T C A C T G A A G C T A G C T T C G A A T G C C G T A A C T G T G A C A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

PH0023.1_Dlx4/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTGTAATTACAGC--
GTCGGTAATTATNGNGN
 A C G T A C G T T G A C G C A T A T C G A G C T G T C A C T G A A G C T A G C T T C G A A T G C C G T A A C T G T G A C A C G T A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CTGTAATTACAGC
TTGAATGAAATTCGA--
 A C G T A C G T A C G T A C G T T G A C G C A T A T C G A G C T G T C A C T G A A G C T A G C T T C G A A T G C C G T A A C T G T G A C
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A A C G T A C G T

PH0061.1_Hoxb6/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTGTAATTACAGC
TATTGGTAATTACCTT
 A C G T A C G T A C G T T G A C G C A T A T C G A G C T G T C A C T G A A G C T A G C T T C G A A T G C C G T A A C T G T G A C
G C A T G C T A C A G T C A G T A T C G A C T G A G C T G T C A C G T A C G A T C A G T C T G A G T A C T A G C C A G T A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CTGTAATTACAGC
-------CACAGN
 T G A C G C A T A T C G A G C T G T C A C T G A A G C T A G C T T C G A A T G C C G T A A C T G T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGTAATTACAGC-
---AAATCACAGCA
 T G A C G C A T A T C G A G C T G T C A C T G A A G C T A G C T T C G A A T G C C G T A A C T G T G A C A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CTGTAATTACAGC-----
-GATATTGACAGCTGCGT
 T G A C G C A T A T C G A G C T G T C A C T G A A G C T A G C T T C G A A T G C C G T A A C T G T G A C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T