Information for 5-GCCGCAAGAT (Motif 5)

A C T G A G T C G T A C T C A G A G T C G T C A C T G A A C T G T C G A A G C T
Reverse Opposite:
C T G A A G C T A G T C A G C T A C G T A C T G A G T C A C T G A C T G T A G C
p-value:1e-13
log p-value:-3.108e+01
Information Content per bp:1.847
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif58.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets37.2 +/- 27.4bp
Average Position of motif in Background53.5 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCCGCAAGAT
AAACCGCAA---
 A C G T A C G T A C T G A G T C G T A C T C A G A G T C G T C A C T G A A C T G T C G A A G C T
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCGCAAGAT
ANCCGGAAGT-
 A C G T A C T G A G T C G T A C T C A G A G T C G T C A C T G A A C T G T C G A A G C T
C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GCCGCAAGAT
AAACCGCAAA--
 A C G T A C G T A C T G A G T C G T A C T C A G A G T C G T C A C T G A A C T G T C G A A G C T
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCGCAAGAT
GTCACATGAY
 A C T G A G T C G T A C T C A G A G T C G T C A C T G A A C T G T C G A A G C T
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

ETS(ETS)/Promoter/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCCGCAAGAT
AACCGGAAGT-
 A C G T A C T G A G T C G T A C T C A G A G T C G T C A C T G A A C T G T C G A A G C T
T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCGCAAGAT-
NCCGGAAGTGG
 A C T G A G T C G T A C T C A G A G T C G T C A C T G A A C T G T C G A A G C T A C G T
T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCGCAAGAT
NACCGGAAGT-
 A C G T A C T G A G T C G T A C T C A G A G T C G T C A C T G A A C T G T C G A A G C T
T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCGCAAGAT
ACCGGAAG--
 A C T G A G T C G T A C T C A G A G T C G T C A C T G A A C T G T C G A A G C T
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCGCAAGAT--
-CCGGAAGTGGC
 A C T G A G T C G T A C T C A G A G T C G T C A C T G A A C T G T C G A A G C T A C G T A C G T
A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GCCGCAAGAT
CGCCTCAGGCA
 A C G T A C T G A G T C G T A C T C A G A G T C G T C A C T G A A C T G T C G A A G C T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A