Information for 2-SCACGTGSBH (Motif 2)

A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T G C A G C T G A T C
Reverse Opposite:
C T A G T C G A T A C G A G T C C G T A G A T C T C A G G A C T A C T G T A G C
p-value:1e-39
log p-value:-9.097e+01
Information Content per bp:1.641
Number of Target Sequences with motif160.0
Percentage of Target Sequences with motif19.16%
Number of Background Sequences with motif2730.6
Percentage of Background Sequences with motif5.80%
Average Position of motif in Targets52.2 +/- 24.9bp
Average Position of motif in Background50.9 +/- 33.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:SCACGTGSBH
CCACGTGGNN
 A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T G C A G C T G A T C
T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-SCACGTGSBH-
ACCACGTGGTNN
 A C G T A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T G C A G C T G A T C A C G T
T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:SCACGTGSBH
CCACGTGGNN
 A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T G C A G C T G A T C
T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C

MAX/MA0058.3/Jaspar

Match Rank:4
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-SCACGTGSBH
NNCACGTGGT-
 A C G T A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T G C A G C T G A T C
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:SCACGTGSBH
-CACGTGNC-
 A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T G C A G C T G A T C
A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T

MNT/MA0825.1/Jaspar

Match Rank:6
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-SCACGTGSBH
NGCACGTGNT-
 A C G T A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T G C A G C T G A T C
C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:SCACGTGSBH
-CACGTGBN-
 A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T G C A G C T G A T C
A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:SCACGTGSBH
-CACGTGDC-
 A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T G C A G C T G A T C
A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:SCACGTGSBH
-CACGTGGN-
 A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T G C A G C T G A T C
A C G T G T A C C T G A A G T C C T A G G A C T A C T G A T C G A G C T A C G T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:10
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:SCACGTGSBH
-CACGTGNT-
 A T C G A G T C C T G A A G T C C T A G C G A T A C T G A T G C A G C T G A T C
A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T