Information for 5-ACAGCGCCCCCTG (Motif 5)

C T G A A T G C C T G A A T C G A G T C C T A G A G T C A G T C G T A C A G T C A G T C C G A T A T C G
Reverse Opposite:
A T G C C G T A A C T G C T A G A C T G A C T G A C T G A G T C C T A G A T G C A G C T A T C G A G C T
p-value:1e-18
log p-value:-4.244e+01
Information Content per bp:1.798
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.98%
Number of Background Sequences with motif20.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.4 +/- 27.5bp
Average Position of motif in Background68.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--ACAGCGCCCCCTG-----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T C T G A A T G C C T G A A T C G A G T C C T A G A G T C A G T C G T A C A G T C A G T C C G A T A T C G A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

INSM1/MA0155.1/Jaspar

Match Rank:2
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:ACAGCGCCCCCTG---
----CGCCCCCTGACA
 C T G A A T G C C T G A A T C G A G T C C T A G A G T C A G T C G T A C A G T C A G T C C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ACAGCGCCCCCTG-------
-TAGCGCCCCCTGGTGGCCA
 C T G A A T G C C T G A A T C G A G T C C T A G A G T C A G T C G T A C A G T C A G T C C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACAGCGCCCCCTG-------
ANAGTGCCACCTGGTGGCCA
 C T G A A T G C C T G A A T C G A G T C C T A G A G T C A G T C G T A C A G T C A G T C C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACAGCGCCCCCTG---
GGTCCCGCCCCCTTCTC
 A C G T C T G A A T G C C T G A A T C G A G T C C T A G A G T C A G T C G T A C A G T C A G T C C G A T A T C G A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ACAGCGCCCCCTG
---AAGACCCYYN
 C T G A A T G C C T G A A T C G A G T C C T A G A G T C A G T C G T A C A G T C A G T C C G A T A T C G
A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCGCCCCCTG---
NNNNTTGACCCCTNNNN
 A C G T C T G A A T G C C T G A A T C G A G T C C T A G A G T C A G T C G T A C A G T C A G T C C G A T A T C G A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAGCGCCCCCTG
ACAAAGGNBCCT-
 C T G A A T G C C T G A A T C G A G T C C T A G A G T C A G T C G T A C A G T C A G T C C G A T A T C G
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ACAGCGCCCCCTG
GCTCCGCCCMCY-
 C T G A A T G C C T G A A T C G A G T C C T A G A G T C A G T C G T A C A G T C A G T C C G A T A T C G
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

SP8/MA0747.1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACAGCGCCCCCTG
GCCACGCCCACT-
 C T G A A T G C C T G A A T C G A G T C C T A G A G T C A G T C G T A C A G T C A G T C C G A T A T C G
T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T A C G T