Information for 4-CTTTGTGATGBAA (Motif 3)

T G A C C G A T A G C T A C G T A T C G C G A T C A T G C G T A A C G T A C T G A C G T C G T A C G T A
Reverse Opposite:
C G A T A C G T T G C A A G T C C G T A A C G T G T A C C G T A T A G C C G T A C T G A C G T A A C T G
p-value:1e-22
log p-value:-5.123e+01
Information Content per bp:1.794
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.9 +/- 20.5bp
Average Position of motif in Background42.9 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:CTTTGTGATGBAA--
CTTTGTTATGCAAAT
 T G A C C G A T A G C T A C G T A T C G C G A T C A T G C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CTTTGTGATGBAA--
CATTGTTATGCAAAT
 T G A C C G A T A G C T A C G T A T C G C G A T C A T G C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.73
Offset:4
Orientation:forward strand
Alignment:CTTTGTGATGBAA-
----MTGATGCAAT
 T G A C C G A T A G C T A C G T A T C G C G A T C A T G C G T A A C G T A C T G A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:CTTTGTGATGBAA-
----ATGATGCAAT
 T G A C C G A T A G C T A C G T A T C G C G A T C A T G C G T A A C G T A C T G A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:5
Score:0.68
Offset:4
Orientation:forward strand
Alignment:CTTTGTGATGBAA-
----RTTATGYAAB
 T G A C C G A T A G C T A C G T A T C G C G A T C A T G C G T A A C G T A C T G A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.66
Offset:3
Orientation:forward strand
Alignment:CTTTGTGATGBAA
---NATGTTGCAA
 T G A C C G A T A G C T A C G T A T C G C G A T C A T G C G T A A C G T A C T G A C G T C G T A C G T A
A C G T A C G T A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

NFIL3/MA0025.1/Jaspar

Match Rank:7
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CTTTGTGATGBAA---
-----TTATGTAACAT
 T G A C C G A T A G C T A C G T A T C G C G A T C A T G C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T A C G T C G T A A G C T C T A G A C G T C G T A C T G A A G T C T C A G G A C T

ATF4/MA0833.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CTTTGTGATGBAA--
--GGATGATGCAATA
 T G A C C G A T A G C T A C G T A T C G C G A T C A T G C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T
A C G T A C G T C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTTTGTGATGBAA--
NNNNNATTGATGNGTGN
 A C G T A C G T T G A C C G A T A G C T A C G T A T C G C G A T C A T G C G T A A C G T A C T G A C G T C G T A C G T A A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:10
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:CTTTGTGATGBAA-
-----TTATGCAAT
 T G A C C G A T A G C T A C G T A T C G C G A T C A T G C G T A A C G T A C T G A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T