Information for 13-AGVTGCTGAGRAMABT (Motif 20)

G C T A T A C G T G A C C A G T A T C G T A G C C G A T A C T G C T G A C T A G T C A G G T C A G T C A T C G A A T G C A G C T
Reverse Opposite:
T C G A T A C G A G C T A C G T A C G T A G T C G A T C A G C T T G A C C G T A A T C G T A G C G T C A A C T G A T G C C G A T
p-value:1e-9
log p-value:-2.099e+01
Information Content per bp:1.575
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.53%
Number of Background Sequences with motif365.9
Percentage of Background Sequences with motif0.78%
Average Position of motif in Targets45.0 +/- 24.4bp
Average Position of motif in Background49.5 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGVTGCTGAGRAMABT
AATTTGCTGAC------
 A C G T G C T A T A C G T G A C C A G T A T C G T A G C C G A T A C T G C T G A C T A G T C A G G T C A G T C A T C G A A T G C A G C T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGVTGCTGAGRAMABT
AAAATGCTGACT-----
 A C G T G C T A T A C G T G A C C A G T A T C G T A G C C G A T A C T G C T G A C T A G T C A G G T C A G T C A T C G A A T G C A G C T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGVTGCTGAGRAMABT
---NGCTN--------
 G C T A T A C G T G A C C A G T A T C G T A G C C G A T A C T G C T G A C T A G T C A G G T C A G T C A T C G A A T G C A G C T
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGVTGCTGAGRAMABT
AAAWWTGCTGACWWD---
 A C G T A C G T G C T A T A C G T G A C C A G T A T C G T A G C C G A T A C T G C T G A C T A G T C A G G T C A G T C A T C G A A T G C A G C T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGVTGCTGAGRAMABT
-CCTGCTGAGH-----
 G C T A T A C G T G A C C A G T A T C G T A G C C G A T A C T G C T G A C T A G T C A G G T C A G T C A T C G A A T G C A G C T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGVTGCTGAGRAMABT
---TGCTGACTCA---
 G C T A T A C G T G A C C A G T A T C G T A G C C G A T A C T G C T G A C T A G T C A G G T C A G T C A T C G A A T G C A G C T
A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGVTGCTGAGRAMABT
AAANTGCTGACTNAG--
 A C G T G C T A T A C G T G A C C A G T A T C G T A G C C G A T A C T G C T G A C T A G T C A G G T C A G T C A T C G A A T G C A G C T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AGVTGCTGAGRAMABT
NAAAANTGCTGACTCAGC-
 A C G T A C G T A C G T G C T A T A C G T G A C C A G T A T C G T A G C C G A T A C T G C T G A C T A G T C A G G T C A G T C A T C G A A T G C A G C T
C G T A C T G A C G T A C G T A C G T A G C A T G C A T C T A G G T A C C G A T A C T G C G T A A T G C G C A T G A T C C G T A C A T G T A G C A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--AGVTGCTGAGRAMABT
AAATTTGCTGACTTAGA-
 A C G T A C G T G C T A T A C G T G A C C A G T A T C G T A G C C G A T A C T G C T G A C T A G T C A G G T C A G T C A T C G A A T G C A G C T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGVTGCTGAGRAMABT
---TTCTNMGGAA---
 G C T A T A C G T G A C C A G T A T C G T A G C C G A T A C T G C T G A C T A G T C A G G T C A G T C A T C G A A T G C A G C T
A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T