Information for 14-CAGCAAGAATTCAGCT (Motif 20)

A G T C C G T A A C T G A G T C C G T A C T G A A C T G G T C A C T G A A C G T A G C T A G T C C G T A A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C C G A T A C T G C T G A G T C A A G C T A C G T A G T C A G C T A C G T A C T G A G T C C G A T A C T G
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.916
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.62%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 18.8bp
Average Position of motif in Background46.8 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAAGAATTCAGCT
CCACACAGCAGGAGA------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C T G A A C T G G T C A C T G A A C G T A G C T A G T C C G T A A T C G A G T C A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAAGAATTCAGCT
CCACACAGCAGGAGA------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C T G A A C T G G T C A C T G A A C G T A G C T A G T C C G T A A T C G A G T C A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAAGAATTCAGCT
GAGCACAGCAGGACA------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C T G A A C T G G T C A C T G A A C G T A G C T A G T C C G T A A T C G A G T C A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAGCAAGAATTCAGCT
CACAGCAGGGGG------
 A C G T A C G T A G T C C G T A A C T G A G T C C G T A C T G A A C T G G T C A C T G A A C G T A G C T A G T C C G T A A T C G A G T C A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAAGAATTCAGCT
DCTCAGCAGG---------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C T G A A C T G G T C A C T G A A C G T A G C T A G T C C G T A A T C G A G T C A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CAGCAAGAATTCAGCT
DCHCAGCAGGRGGCC----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C C G T A C T G A A C T G G T C A C T G A A C G T A G C T A G T C C G T A A T C G A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CAGCAAGAATTCAGCT
-ANCAGGAAGT-----
 A G T C C G T A A C T G A G T C C G T A C T G A A C T G G T C A C T G A A C G T A G C T A G T C C G T A A T C G A G T C A C G T
A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CAGCAAGAATTCAGCT-
-NNNNTGAATTCANNNC
 A G T C C G T A A C T G A G T C C G T A C T G A A C T G G T C A C T G A A C G T A G C T A G T C C G T A A T C G A G T C A C G T A C G T
A C G T A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CAGCAAGAATTCAGCT
TTGACCGAGAATTCC---
 A C G T A C G T A G T C C G T A A C T G A G T C C G T A C T G A A C T G G T C A C T G A A C G T A G C T A G T C C G T A A T C G A G T C A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAGCAAGAATTCAGCT
-NACAGGAAAT-----
 A G T C C G T A A C T G A G T C C G T A C T G A A C T G G T C A C T G A A C G T A G C T A G T C C G T A A T C G A G T C A C G T
A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T