Information for 7-GAATGCTAAGAAA (Motif 9)

C T A G C G T A C T G A A C G T A T C G A T G C A C G T C G T A C T G A A C T G C G T A C G T A C G T A
Reverse Opposite:
C G A T A C G T A C G T A G T C A G C T A C G T C G T A A T C G A T G C C G T A A G C T C G A T A G T C
p-value:1e-15
log p-value:-3.577e+01
Information Content per bp:1.901
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.4 +/- 19.9bp
Average Position of motif in Background39.3 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAATGCTAAGAAA
-NTTTCTNAGAAA
 C T A G C G T A C T G A A C G T A T C G A T G C A C G T C G T A C T G A A C T G C G T A C G T A C G T A
A C G T C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAATGCTAAGAAA
-TATGCWAATBAV
 C T A G C G T A C T G A A C G T A T C G A T G C A C G T C G T A C T G A A C T G C G T A C G T A C G T A
A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

Stat4/MA0518.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAATGCTAAGAAA---
--TTTCCAGGAAATGG
 C T A G C G T A C T G A A C G T A T C G A T G C A C G T C G T A C T G A A C T G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

PB0022.1_Gata5_1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GAATGCTAAGAAA--
TAAACTGATAAGAAGAT
 A C G T A C G T C T A G C G T A C T G A A C G T A T C G A T G C A C G T C G T A C T G A A C T G C G T A C G T A C G T A A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAATGCTAAGAAA
-ATTTCCAAGAA-
 C T A G C G T A C T G A A C G T A T C G A T G C A C G T C G T A C T G A A C T G C G T A C G T A C G T A
A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAATGCTAAGAAA
-WATGCAAATGAG
 C T A G C G T A C T G A A C G T A T C G A T G C A C G T C G T A C T G A A C T G C G T A C G T A C G T A
A C G T G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

GATA2/MA0036.2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAATGCTAAGAAA--
-NCAGATAAGAANNN
 C T A G C G T A C T G A A C G T A T C G A T G C A C G T C G T A C T G A A C T G C G T A C G T A C G T A A C G T A C G T
A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GAATGCTAAGAAA-----
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T C T A G C G T A C T G A A C G T A T C G A T G C A C G T C G T A C T G A A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

PB0023.1_Gata6_1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAATGCTAAGAAA--
TATAGAGATAAGAATTG
 A C G T A C G T C T A G C G T A C T G A A C G T A T C G A T G C A C G T C G T A C T G A A C T G C G T A C G T A C G T A A C G T A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAATGCTAAGAAA-
TTGTATGCAAATTAGA
 A C G T A C G T C T A G C G T A C T G A A C G T A T C G A T G C A C G T C G T A C T G A A C T G C G T A C G T A C G T A A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A