Information for 24-CAATMTTGAT (Motif 44)

G A T C C G T A G T C A G C A T T G A C C A G T G A C T A C T G G C T A A G C T
Reverse Opposite:
T C G A C G A T G T A C C T G A G T C A A C T G C G T A C A G T G C A T C T A G
p-value:1e-3
log p-value:-8.968e+00
Information Content per bp:1.718
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.71%
Number of Background Sequences with motif235.7
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets56.2 +/- 25.8bp
Average Position of motif in Background49.0 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CAATMTTGAT---
CTAATATTGCTAAA
 A C G T G A T C C G T A G T C A G C A T T G A C C A G T G A C T A C T G G C T A A G C T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CAATMTTGAT---
CTAATATTGCTAAA
 A C G T G A T C C G T A G T C A G C A T T G A C C A G T G A C T A C T G G C T A A G C T A C G T A C G T A C G T
T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAATMTTGAT--
--NTATYGATCH
 G A T C C G T A G T C A G C A T T G A C C A G T G A C T A C T G G C T A A G C T A C G T A C G T
A C G T A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

PH0134.1_Pbx1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAATMTTGAT------
NNNNNATTGATGNGTGN
 A C G T G A T C C G T A G T C A G C A T T G A C C A G T G A C T A C T G G C T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:5
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CAATMTTGAT----
----ATTGATTYND
 G A T C C G T A G T C A G C A T T G A C C A G T G A C T A C T G G C T A A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

YY1/MA0095.2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CAATMTTGAT
GCNGCCATCTTG--
 A C G T A C G T A C G T A C G T G A T C C G T A G T C A G C A T T G A C C A G T G A C T A C T G G C T A A G C T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAATMTTGAT-----
-ANTATCGATTTTTN
 G A T C C G T A G T C A G C A T T G A C C A G T G A C T A C T G G C T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C T G A C G A T G C A T C T G A C G A T G A T C C T A G T G C A A G C T G A C T C G A T G C A T G A C T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAATMTTGAT--
--NTATCGATTA
 G A T C C G T A G T C A G C A T T G A C C A G T G A C T A C T G G C T A A G C T A C G T A C G T
A C G T A C G T C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

ONECUT2/MA0756.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAATMTTGAT-----
-ATTATCGATTTTTT
 G A T C C G T A G T C A G C A T T G A C C A G T G A C T A C T G G C T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T C G T A C G A T A G T C C A T G G T C A G A C T G A C T C G A T G C A T G A C T A G C T

ONECUT3/MA0757.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAATMTTGAT-----
-NTTATTGATTTTTT
 G A T C C G T A G T C A G C A T T G A C C A G T G A C T A C T G G C T A A G C T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C G A T G C A T G C T A G C A T A G C T C A T G C T G A G A C T G A C T C G A T G C A T G A C T A G C T