Information for 17-ATTSATTAGGGAAGGC (Motif 27)

G T C A C A G T C G A T A T G C C G T A A G C T A G C T C G T A A C T G C T A G A T C G C G T A C T G A C T A G A T C G A G T C
Reverse Opposite:
C T A G A T G C A G T C A G C T A C G T A T G C G A T C G T A C A C G T C T G A C T G A A C G T A T C G C G T A G C T A A C G T
p-value:1e-9
log p-value:-2.210e+01
Information Content per bp:1.761
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.6 +/- 26.8bp
Average Position of motif in Background74.0 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EVX2/MA0888.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ATTSATTAGGGAAGGC
GGTAATTAGC------
 G T C A C A G T C G A T A T G C C G T A A G C T A G C T C G T A A C T G C T A G A T C G C G T A C T G A C T A G A T C G A G T C
T A C G T A C G G A C T T G C A T C G A A C G T A G C T C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATTSATTAGGGAAGGC
ACTAATTAGC------
 G T C A C A G T C G A T A T G C C G T A A G C T A G C T C G T A A C T G C T A G A T C G C G T A C T G A C T A G A T C G A G T C
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATTSATTAGGGAAGGC
GGTAATTAGC------
 G T C A C A G T C G A T A T G C C G T A A G C T A G C T C G T A A C T G C T A G A T C G C G T A C T G A C T A G A T C G A G T C
T C A G T A C G G A C T T C G A T C G A A C G T G A C T C T G A A T C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

EMX1/MA0612.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATTSATTAGGGAAGGC
NNTAATTAGN------
 G T C A C A G T C G A T A T G C C G T A A G C T A G C T C G T A A C T G C T A G A T C G C G T A C T G A C T A G A T C G A G T C
T C A G A T C G G A C T G T C A G C T A G C A T A G C T C T G A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATTSATTAGGGAAGGC
ACCGATTAG-------
 G T C A C A G T C G A T A T G C C G T A A G C T A G C T C G T A A C T G C T A G A T C G C G T A C T G A C T A G A T C G A G T C
C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HOXB2/MA0902.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATTSATTAGGGAAGGC
AGTAATTAAC------
 G T C A C A G T C G A T A T G C C G T A A G C T A G C T C G T A A C T G C T A G A T C G C G T A C T G A C T A G A T C G A G T C
T C G A T A C G G A C T T G C A T C G A A C G T G A C T G C T A T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATTSATTAGGGAAGGC
GTACTAATTAGTGGCG--
 A C G T A C G T G T C A C A G T C G A T A T G C C G T A A G C T A G C T C G T A A C T G C T A G A T C G C G T A C T G A C T A G A T C G A G T C
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G A C G T A C G T

PDX1/MA0132.2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ATTSATTAGGGAAGGC
-GTAATTAG-------
 G T C A C A G T C G A T A T G C C G T A A G C T A G C T C G T A A C T G C T A G A T C G C G T A C T G A C T A G A T C G A G T C
A C G T T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0132.1_Pax6/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----ATTSATTAGGGAAGGC
GNNAATTAATTAATCA----
 A C G T A C G T A C G T A C G T G T C A C A G T C G A T A T G C C G T A A G C T A G C T C G T A A C T G C T A G A T C G C G T A C T G A C T A G A T C G A G T C
C A T G G C A T A T G C T G C A T G C A G A C T G C A T T C G A G C T A C G A T A C G T C G T A C T G A A C G T G A T C T C G A A C G T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ATTSATTAGGGAAGGC
-NNAATTAGTCACGGT
 G T C A C A G T C G A T A T G C C G T A A G C T A G C T C G T A A C T G C T A G A T C G C G T A C T G A C T A G A T C G A G T C
A C G T A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T