Information for 13-TGTAAATGTC (Motif 19)

C A G T A C T G C A G T C G T A C T G A T G C A C A G T A C T G G C A T G T A C
Reverse Opposite:
C A T G C G T A T G A C G T C A A C G T G A C T G C A T G T C A T G A C G T C A
p-value:1e-11
log p-value:-2.655e+01
Information Content per bp:1.660
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.12%
Number of Background Sequences with motif645.4
Percentage of Background Sequences with motif1.34%
Average Position of motif in Targets50.2 +/- 27.6bp
Average Position of motif in Background50.4 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TGTAAATGTC
TATGTAAATAT-
 A C G T A C G T C A G T A C T G C A G T C G T A C T G A T G C A C A G T A C T G G C A T G T A C
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGTAAATGTC
WATGCAAATGAG
 A C G T A C G T C A G T A C T G C A G T C G T A C T G A T G C A C A G T A C T G G C A T G T A C
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TGTAAATGTC
TATGCWAATBAV
 A C G T A C G T C A G T A C T G C A G T C G T A C T G A T G C A C A G T A C T G G C A T G T A C
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

POU5F1B/MA0792.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGTAAATGTC
TATGCAAAT---
 A C G T A C G T C A G T A C T G C A G T C G T A C T G A T G C A C A G T A C T G G C A T G T A C
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGTAAATGTC
TTATGCAAATTA-
 A C G T A C G T A C G T C A G T A C T G C A G T C G T A C T G A T G C A C A G T A C T G G C A T G T A C
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGTAAATGTC
ATATGCAAATNNN
 A C G T A C G T A C G T C A G T A C T G C A G T C G T A C T G A T G C A C A G T A C T G G C A T G T A C
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGTAAATGTC
TTATGCAAAT---
 A C G T A C G T A C G T C A G T A C T G C A G T C G T A C T G A T G C A C A G T A C T G G C A T G T A C
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGTAAATGTC-
ANGNAAAGGTCA
 A C G T C A G T A C T G C A G T C G T A C T G A T G C A C A G T A C T G G C A T G T A C A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

POU3F2/MA0787.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGTAAATGTC
TTATGCAAATTA-
 A C G T A C G T A C G T C A G T A C T G C A G T C G T A C T G A T G C A C A G T A C T G G C A T G T A C
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TGTAAATGTC
TATGCAAAT---
 A C G T A C G T C A G T A C T G C A G T C G T A C T G A T G C A C A G T A C T G G C A T G T A C
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T